Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00612 ATGGATGCGCGTCGAGCTCCGCGCGCCGTCATTGACCCTAAGGTCCGCAGAGTCGGGTTCTTCGCTCCACCCGAACCCGACCCGATCTCATTCGAAGTCTCTCCCTCCGCCAACTCCCTCTCGCCGGTCATGATCCCTCCGCCGCTCCATTCGTCGGAGAATCTCGGCCTCCACACTCGTCCCGCCGTGTCTTCCCCTTCCGGAGAGGAATCCTTCGCCGCCGGGAGCTATTCCAGCTCGTCGGAGTTCTTCCCCGCTCCGATGTCTCCGTCGCCGTCGACTTACTCGAGCAGGATCGTCGCCGGTGACGGAGACTTCTACGACGGCGGTAGGGTGGCGTCTTCGTTTCCTCGCGGCGGGATTGACTTGACGGCGACGAAGGCGAGTAGCGTTCCGGCGAGCGAATTAACAACGGTTTCGGTGGTGAATGCTGCTTCCCTTGCGATTCACGAAAGAGAGAAAGCTGACAAAGGAGGAGGTTCAGCAGTGGAAGTGAAAGACCAAGCTCTGAATACTAAACAGAAGAAAGAGAAGACCTCAAAAGCTGAAAGACGAGCTCTTCAAGAAGCTCAACGAGCTGCTAAGGCTGCTGCAAAAGCTGAAGGAAATAAGGCATCTGGAACTCTGGCTTCAGTAAATGTAAAACCAGCTAAAGCTGCAAAGACCTCGCAAAAAGTTGATAATGCTTCAGTTGCAGCCTCTGAGAAGAAAGGGGGTGATCGTCCACCAGAAAAAGATAGAAAGAAAGATGTTCCTCAACCACGCATGCAATATGATGATAAGAGCAGAGTGGAGAAAGCCAAACGGCGTGCTGTGGTAAAACAAACTGAAGCTAAGAACAGAGTTGAACTGTTCAGGCATTTGCCACAGTATGAACATGGGAGTCAGCTCCCTGATCTTGAGGCAAAGTTTTTCCAGCTTGGTGCTGTGCATCCTGCTGTTTATAAGGTAGGTTTGCAGTATCTGTCTGGAGATATATCTGGTGGCAATGCTCGTTGTATTGCTATGCTTCAAGCATTTCAAGAGGCCATCAAAGATTATAGGGTTCCATTTGAGAAGACTCTTGTGAGGGACTTAACAGCAAAAATAAGTAGTTATGTTTCTTTTCTCATCGAGTGTCGACCACTTTCTATCAGCATGGGCAATGCAATTAGATTTCTCAAAAGTCGAATTGCCAAGCTACCTCTGACGCTGTCTGAGTCAGAATCAAAAACCTTTCTTCAATCAGATATTGAGCGTTTTATAAATGAGAAAATTATACTTGCCAACAAGGTGATAGTCAAGCATGCTGTTACAAAAATAAGAGATGGTGATGTTCTTCTTACTTATGGGTCTTCGTCGGCAGTTGAAATGATACTGTTACATGCACATGAGTTAGGGAAACAGTTTCGAGTTGTAGTGGTAGACTCTCGTCCAAAACTTAGAGGGAAGCTTTTACTTCGTAGGCTAGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAACGCCGTTTCCTACATAATGAATGAAGTTACCCGAGTCTTTCTGGGTGCTTCATCAGTGTTGTCTAATGGAACAGTTTATTCAGGAGTTGGGACTGCTTGTGTTGCAATGGTTGCCCATGCATTCCGTGTCCCTGTTTTAGTATGTTGTGAGGCTTATAAATTTCATGAAAGGGTACAGCATGATTCCATATGCTCAAATGAACTTGGTGATCCAGACATCATTTCTACGGTTCACAGTAGAGAGGATGTCAACCACTTGGAAGCTTGGGCCAATACTGAAAATCTGCAACTTCTAAACCTGATCTATGATGCAACACCTTCAGATTACGTTTCAATGATAATCACAGATTATGGCATGGTCCCACCCACAAGTGTACCTGTAATTGTAAGGGAATATAGCAGAGAACAGGTGTGGATATGA 1908 0.467 MDARRAPRAVIDPKVRRVGFFAPPEPDPISFEVSPSANSLSPVMIPPPLHSSENLGLHTRPAVSSPSGEESFAAGSYSSSSEFFPAPMSPSPSTYSSRIVAGDGDFYDGGRVASSFPRGGIDLTATKASSVPASELTTVSVVNAASLAIHEREKADKGGGSAVEVKDQALNTKQKKEKTSKAERRALQEAQRAAKAAAKAEGNKASGTLASVNVKPAKAAKTSQKVDNASVAASEKKGGDRPPEKDRKKDVPQPRMQYDDKSRVEKAKRRAVVKQTEAKNRVELFRHLPQYEHGSQLPDLEAKFFQLGAVHPAVYKVGLQYLSGDISGGNARCIAMLQAFQEAIKDYRVPFEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESESKTFLQSDIERFINEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGKQFRVVVVDSRPKLRGKLLLRRLVEKGLSCTYTHINAVSYIMNEVTRVFLGASSVLSNGTVYSGVGTACVAMVAHAFRVPVLVCCEAYKFHERVQHDSICSNELGDPDIISTVHSREDVNHLEAWANTENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYSREQVWI 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00612 635 MobiDBLite consensus disorder prediction 57 94 - -
Pumo5g00612 635 Gene3D - 421 628 IPR042529 -
Pumo5g00612 635 Pfam Initiation factor 2 subunit family 326 618 IPR000649 GO:0044237
Pumo5g00612 635 SUPERFAMILY NagB/RpiA/CoA transferase-like 310 628 IPR037171 -
Pumo5g00612 635 Coils Coil 173 193 - -
Pumo5g00612 635 MobiDBLite consensus disorder prediction 169 190 - -
Pumo5g00612 635 MobiDBLite consensus disorder prediction 151 273 - -
Pumo5g00612 635 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 35 632 - -
Pumo5g00612 635 MobiDBLite consensus disorder prediction 51 94 - -
Pumo5g00612 635 MobiDBLite consensus disorder prediction 237 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00612 Pumo-Chr5 11956988 11962569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00612 1 635 Eukaryotic Initiation Factors Gene Family AT5G38640 66.867 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00612 K03680 - gmx:100785938 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00612 5 11956988 11962569 Pumo5g00612 5 11956988 11962569 ECH