Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g00604 | ATGGTTGCCGCCAAGAAAACCAAGAAGACCCATGAGAGCATCAACAACAGGCTCGCTCTTGTCATGAAGAGTGGCAAATACACACTCGGTTATAAGACCGTTCTCAAATCTCTTAGGAGCTCCAAAGGGAAATTGATTATCATTGCTAACAACTGCCCCCCTTTGAGGAAGTCAGAGATTGAATACTATGCTATGTTGGCAAAGGTTGGAGTTCATCATTACAATGGGAACAATGTTGATTTGGGCACTGCATGCGGCAAATATTACAGAGTGTGCTGCCTTAGCATTATTGATCCTGGTGATTCAGATATCATTAAGACACTGCCTGGCGAACAGTAA | 339 | 0.4336 | MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGNNVDLGTACGKYYRVCCLSIIDPGDSDIIKTLPGEQ | 112 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g00604 | 112 | Pfam | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | 13 | 105 | IPR004038 | - | |
Pumo5g00604 | 112 | Hamap | 50S ribosomal protein L30e [rpl30e]. | 12 | 109 | IPR000231 | GO:0003723|GO:0003735|GO:0022625 | |
Pumo5g00604 | 112 | ProSitePatterns | Ribosomal protein L30e signature 1. | 24 | 48 | IPR022991 | - | |
Pumo5g00604 | 112 | Gene3D | - | 2 | 108 | IPR029064 | - | |
Pumo5g00604 | 112 | ProSitePatterns | Ribosomal protein L30e signature 2. | 80 | 100 | IPR022991 | - | |
Pumo5g00604 | 112 | FunFam | 60S ribosomal protein L30 | 2 | 108 | - | - | |
Pumo5g00604 | 112 | SUPERFAMILY | L30e-like | 13 | 106 | IPR029064 | - | |
Pumo5g00604 | 112 | PANTHER | RIBOSOMAL PROTEIN L30 | 1 | 110 | IPR039109 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g00604 | Pumo-Chr5 | 11856187 | 11858126 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g00604 | 1 | 112 | Cytoplasmic Ribosomal Protein Gene Family | AT1G36240 | 87.500 | 5.09e-72 | 208 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g00604 | K02908 | - | gmx:100806260 | 229.95 |