Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00595 ATGCCTCATTTTGGAGCTTCTGAGATTGGTTTCTGGTTGTGGCTTTGTTTGTTTGTTGTGCTTTCATGTTTAGGAAAAGGCACACCCCTTCTTCTCTTGCTAGGGAATTGTTGGCATTCCAGCCACTTTTTCTTCTCTTCTTGTTCAGCTTGCACCACAACACTGTGCAAGTGTCAAGGAAGGTTGAGTAAACATGTTTCCTCAGAACCTCCCTCACCTTCTAGGCCATCACCATCGGCACCATCTTCAGGATACAAGGATGACCCTAGGAAGATAATTTTGAGCATGGTTTTAGGAGCAGTCACTGGACTAGTTTGTTCTGTTCTCTTTGCACTTGTGGTTCGTTGTGTTGTTCAGTATCTGAACCGCACACCAATCCTCAAGGGCCCTGTCATATTCTCCCCCAAAATTGCCCCCAAGACACTCCAATCAGCTTTGGCAAAGGAAGACCACTTGCTTGGTTCGAGTCCTAATGGGAAGTACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTCAAAAGGCTAACACCCTTTGAGAGCAATTCCCCGGAGGCTAAGAGAAAATCAGTGAAGAGGCAGATACAAACTGAGCTAGAGCTTCTTGCAAGCCTAAGGCATAGGAACTTGATGAGTTTGAGGGCATATGTTCGTGAGCCTGATGGGTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTTGCTGATGTGTTAAATAGAGTGAGGGAGAATGAGTTGCCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACTTGTGTGCCTCAGATTCTGCACTACAACCTGAAGCCCACAAATGTGATGTTGGATGCTGAGTTTGAACCCAGATTGGCAGATTATGGCTCTGCTAAACTTCTGCCCAACTTGGATAGAGGAACTTCTCTCTACACCCCTCCTGAATGTTTCCATAATTGCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACGGGTAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCCAGCGGGGGAAGTTTGGGATGTTGGCTGAGACACTTGCAGCAAGCCGGCGAGGCACGCGAAGCTCTAGATAAGAGCATGTTAGGGGAAGAAGGTGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA 1290 0.4636 MPHFGASEIGFWLWLCLFVVLSCLGKGTPLLLLLGNCWHSSHFFFSSCSACTTTLCKCQGRLSKHVSSEPPSPSRPSPSAPSSGYKDDPRKIILSMVLGAVTGLVCSVLFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQSALAKEDHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESNSPEAKRKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVLNRVRENELPFGWEVRLRIAVGVVKGLQYLHFTCVPQILHYNLKPTNVMLDAEFEPRLADYGSAKLLPNLDRGTSLYTPPECFHNCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGCWLRHLQQAGEAREALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00595 429 SUPERFAMILY Protein kinase-like (PK-like) 150 423 IPR011009 -
Pumo5g00595 429 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 139 230 - -
Pumo5g00595 429 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 231 428 - -
Pumo5g00595 429 Gene3D Phosphorylase Kinase; domain 1 136 230 - -
Pumo5g00595 429 Gene3D Transferase(Phosphotransferase) domain 1 231 428 - -
Pumo5g00595 429 CDD STKc_IRAK 153 426 - -
Pumo5g00595 429 Pfam Protein kinase domain 149 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00595 429 MobiDBLite consensus disorder prediction 64 86 - -
Pumo5g00595 429 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 42 425 - -
Pumo5g00595 429 ProSiteProfiles Protein kinase domain profile. 147 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00595 Pumo-Chr5 11772066 11774979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00595 63 426 Receptor kinase-like Gene Family AT2G31880 32.840 3.23e-63 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Pumo5g00595 Pkinase 5.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00595 - - gmx:102664273 687.182