Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00591 ATGACCATGGTTCCTTCACAAAACGGGAAACAACAACAGAACATTAATAGGAGTGGTGATTATGTTATTTGCGGTAACACAACAACGCCTAGTGCTATGAACCAGGTTATTGAAGCTGAAGGAGGCTACAACTACAATTGCTTATTAGGATCTGATTTTGTGGTGAGGAGGCACATCATGGCCGAGGCTGAAGAATCATCGAGACACAACAACAACACTAACGAGGAAGCTGAAGTTGGAGGTTGTGGTTCAACCTCAAAGGAAGAAGAAGAAGAAGGAGCAAACAACAACAACAGTAACAATAACAACAACAACAACAATAACTGGCTTCAATTAAGCATAGGTTTGACAAGCACAAAGCAAGAGCATGATCGAACCGTTTCAACAGCAACCGGTTCAGGGCTTGTGGAGTTGGACTTGCTTCCATCACGGCGGAGCTCGGAGCAGCCGCCGGCGATTTTTCCGGTGGTGGCTTCAGGGAGAGGAGGAGGGTCTAGTTTTGGTGGTTCCTCTTCTTCTTCTTTGCTTTTTGAGCAGCATCATCAAACGACGTCGTATTGTTCTTCCATGTCCATGTCTATGGCAAGTGGTCCAATTACCTCAACCTTTGGTCATCAAGAGATGATGAACTGGGCATTTGGTCCACTACTTCCTCATTCTATGCCTATTATGCCCTCTTCTTCATCTTTCACTCCTCTTCCTCCTCCTTCTTCTTCTTCTTCCTCCTCTTCACAACCTTGTTACTCTTCTTTGAGGCCTCCCTTAGGATCTTACTTTCCCACACCCTTTCATCACTTCCCTTCTTCTTCCTCTTCTGGTTTTGATCAATATGACGTGGCTGGGGCAGGACCAAGCTCCGATGTCACCGTTCGAGTTGTTGATCCTCCTAGAAGACCTCATTCTGGAATATGGTTCACGTTACTAGCCTCTCAAAATCAAGCGAGAGAACCATTCTTGCCCCAAATACCTAAGAACTACCTTAGAATTAAAGACGGAAGGATGACAGTTCGGTTGCTATTGAAGTATCTGGTTAGCAAACTCAGTCTGGAAAGCGAATCAGAGATCGAGATAACATGCAGAGGGCAGCAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAACATTTGGAGTCCGAGGGACACCACACGACCTTTGCTTTCAGATTCCTCAACCACAGATCATGTCATGGTGCTCCATTACGGTAGAAGCACTGCACCAGCTTAA 1230 0.4553 MTMVPSQNGKQQQNINRSGDYVICGNTTTPSAMNQVIEAEGGYNYNCLLGSDFVVRRHIMAEAEESSRHNNNTNEEAEVGGCGSTSKEEEEEGANNNNSNNNNNNNNNWLQLSIGLTSTKQEHDRTVSTATGSGLVELDLLPSRRSSEQPPAIFPVVASGRGGGSSFGGSSSSSLLFEQHHQTTSYCSSMSMSMASGPITSTFGHQEMMNWAFGPLLPHSMPIMPSSSSFTPLPPPSSSSSSSSQPCYSSLRPPLGSYFPTPFHHFPSSSSSGFDQYDVAGAGPSSDVTVRVVDPPRRPHSGIWFTLLASQNQAREPFLPQIPKNYLRIKDGRMTVRLLLKYLVSKLSLESESEIEITCRGQQLLPFLTLQHVRDNIWSPRDTTRPLLSDSSTTDHVMVLHYGRSTAPA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00591 409 PANTHER RING FINGER PROTEIN 1 405 IPR044171 GO:0007275
Pumo5g00591 409 MobiDBLite consensus disorder prediction 64 109 - -
Pumo5g00591 409 Gene3D - 298 402 - -
Pumo5g00591 409 MobiDBLite consensus disorder prediction 226 248 - -
Pumo5g00591 409 MobiDBLite consensus disorder prediction 95 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00591 Pumo-Chr5 11692387 11702333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00591 316 403 C3H Transcription Factor Family AT3G23060 38.043 2.71e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00591 - - gmx:102664769 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00591 5 11692387 11702333 Pumo5g00591 5 11692387 11702333 ECH