Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00552 ATGGAGTCCAAACAAGAAGCACCAAGTGTTATTTTAAACTTGATGGGTCTTGATAAAGTGCCTACCCAACATCCTCCTGTTACAGATAAACAGAAAGTGCTCTCTGAGAATTACCTGCAGAAAGTTGCCTCTATTGGTGTCAGAAAGAAGCGTTCATCTCATCAGCATCATTCCTCTGGAATGAATACTAATGAAAAGGAAGAATCTGAGGATGTTTTAAAAGTGGTCAAAGCACTAAGGCGAGGTAAGCACCATAACCCATCAAAGGGAAATGGGAATGAGAATCCTTGTTCTCGCAAAAATTCTCATTTGGATGATGGGCTGCTCCAAGAGATATTTTATCCTAAAAGCATGAAAGTATATCCTGAAATGAGAGATAGAAAGAAAATATCCTATCACATGAATTTTGGTAAGCAGAGTTCAAGATCTTGCAGTAAAATTTCAGAGGAGATTTCTATGCAATCGGCAAATGTTGCAAGCAGAGTTTTAGATGTTGCTTCAAGTTCATTTTTCAGAGGGAATGAAGCATTTGCCAATGATATGCTGAAGCCTGCTTCAAATATTTCAGTTAATGAGATCCAATGTAATTCCCCGTTTCTCTGCTCTGATGGTTCATATGCAGGCTCTGAAGCAAGGAACAAACCTTTGGAACAGAGGGATGTGACTGAAAAATTGCGAGAACTTGGACAGTGTGGTCAAGACTGTACACATAACCAGTTGCCTATGATTTCTGAACATGGAAATGGAGCAAGAAATTTGACTCATCGAAGTGGTTATAGTAATGATAAAATTAAAAGGAACATTAGATGTAAGGCTGGTGTTAATTATAGCTTTGCTAGAAGAGTGCCAATACCTCTTTGTGCAGCTTCAGTTATTGCTGATAATTGTGGAGCTATGAATCAGGATATCTTGTTTCAGAGATATTGGGGTTTGAGAAAGAATGCATCTGCAAATTGGTTATCATGGAAGTCAAAGAATCAAAATGTTAACCAGAAAGAATGTTTAGAAGATGTGAACCTCAGTCCTGGCCATGAGAAATTCCCTTCTCTTTCCTCTTATTTCAATAGTAATCACACTGAAGAGAATTGTATTGGTCATACATCAGAGAAGAGATGTTATGGGAATGATTTGTCTGATAAGGTAACTACGCCTCCCCAATTGTCAAGTTCTAGTCCTTCTTCCGCCTTGAAAGACAGTCAGATCTTGCAAGAGAGATGCTTAATGAATGATGAAGTGAAGAACAAAACGTATGAAGACAGTAGTATGTCTGAGCAAAATGTTGTGTCTCCTGATTCATCAGTTGAATTCTTGGTATCTGATGCAACGACTGATGTTGTTGGCAGGTCACATAATAATCCAACCAAGCATCAATATAAATCAACAGCCTTTATTTTGTCACAAGAAATTGATTCTCTTAGTCATACTTCATATGCTTCAAAGCAACAGGATACATCAGACTTTCAAGAAGATTCTGTTCATTCACTTTGCTCATACTCCCTTGGTAGCATTGAGGAGGCATTTGAACCTAGTCCAATTTCAGTTTTGGATCCCTTATTTGGAGAAGACATTCGATTCAGCTATAAATATGGTGATCATGTATATGATTCCTCTGAAGTGGATGATGAAGAATTTGGTTTGAATGTTTCAAGTGATGAAGATTGTGAGAATGAATCTGTAGGTGACTCTGAAGAAAAGAAAGATATAGCAGGAGTATTTAGAGCTGAAGAAAGTAGGGATTTCTCATATGTTGTTGAGGTCTTAACCGAGGCAGGTATATGTAATAGGAGCTTGTTTACAGAATTTTCTACGTGGCACTCTGCAGAATGTCCTATTAGCCCTTCTGTCTTTGAAATCCTGGAAAAGAAATTTGGTGAGCAGCAACTTTGGAAGAGATCTGAAAGGAAACTTCTCTTTGATCGCATTAACCTAGGGCTGCTAGAGATTCTGCAGCCATATTTGTATATCCCAATGTGGGAAAAGCCCATGTCAAGAAGGTTGAATGCTGAACCAAGCCAGGACATGATTGAGGAGGAGATGTGGGGGTTGCTTGTTGCACAGGAAAAGAAAGCTAGTGAAGGGTTAGCAGACAGTATGCCCGGAGGGGAAATTAGGTGGATAGAACTAGTTGAAGATGTTGGAGATATTGTTAGAGAGATAGTTAAGTTGTTAATAGAGGAGCTTGCAAATGAGATAGTTAGCTTGGAGAATTTTTGA 2214 0.3862 MESKQEAPSVILNLMGLDKVPTQHPPVTDKQKVLSENYLQKVASIGVRKKRSSHQHHSSGMNTNEKEESEDVLKVVKALRRGKHHNPSKGNGNENPCSRKNSHLDDGLLQEIFYPKSMKVYPEMRDRKKISYHMNFGKQSSRSCSKISEEISMQSANVASRVLDVASSSFFRGNEAFANDMLKPASNISVNEIQCNSPFLCSDGSYAGSEARNKPLEQRDVTEKLRELGQCGQDCTHNQLPMISEHGNGARNLTHRSGYSNDKIKRNIRCKAGVNYSFARRVPIPLCAASVIADNCGAMNQDILFQRYWGLRKNASANWLSWKSKNQNVNQKECLEDVNLSPGHEKFPSLSSYFNSNHTEENCIGHTSEKRCYGNDLSDKVTTPPQLSSSSPSSALKDSQILQERCLMNDEVKNKTYEDSSMSEQNVVSPDSSVEFLVSDATTDVVGRSHNNPTKHQYKSTAFILSQEIDSLSHTSYASKQQDTSDFQEDSVHSLCSYSLGSIEEAFEPSPISVLDPLFGEDIRFSYKYGDHVYDSSEVDDEEFGLNVSSDEDCENESVGDSEEKKDIAGVFRAEESRDFSYVVEVLTEAGICNRSLFTEFSTWHSAECPISPSVFEILEKKFGEQQLWKRSERKLLFDRINLGLLEILQPYLYIPMWEKPMSRRLNAEPSQDMIEEEMWGLLVAQEKKASEGLADSMPGGEIRWIELVEDVGDIVREIVKLLIEELANEIVSLENF 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00552 737 PANTHER AFADIN 1 94 - -
Pumo5g00552 737 MobiDBLite consensus disorder prediction 379 398 - -
Pumo5g00552 737 Pfam Domain of unknown function (DUF4378) 579 730 IPR025486 -
Pumo5g00552 737 MobiDBLite consensus disorder prediction 45 102 - -
Pumo5g00552 737 MobiDBLite consensus disorder prediction 60 77 - -
Pumo5g00552 737 MobiDBLite consensus disorder prediction 375 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00552 Pumo-Chr5 11262528 11268054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00552 504 734 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 32.308 6.67e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00552 - - gmx:100796503 1215.29