Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00547 ATGGAGATAACCTACGCATCGCCAAGTTTCTCCGACCTCTTCGCCGCCGCCGCTGCTTCCTCCTCCACCATGCCGTCGTCCGCGCGTCCAGTCAGGATCATTCCCCTCCAGCACCCGACCGCCACGACGTCGTCGCCGCCGCCGCCGCCGAACGTCGCGTTCTCGCGCTGGACCGCGAGGCTCCGGCGAATGACGTGGCTCGAGTGGATCGAATTCTTCCTCCCCTGCCTCCGCTGGATTCGCATCTACAAATGGCGCGAGTATTTCCAGGTCGATCTCATGGCCGGAATCACCGTCGGCGTCATGCTCGTTCCTCAGTCGATGTCGTATGCGAAATTGGCTGGACTTCAACCGATATATGGACTCTACTCTGGTTTTGTGCCCCTATTTGTATATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTGGGCCCAGTGGCATTGGTTTCTCTCTTGGTCTCTAATGTTCTAGGTAGCATAGCTGATTCATCCACTGAATTATACACAGAGCTGGCAATATTACTGTCCCTTATGGTTGGGATAATGGAGTGTACAATGGGACTCTTGAGGCTTGGATGGCTTATTCGTTTCATTAGCCATTCAGTGATTTCTGGCTTTACAACTGCTTCAGCTATTGTCATTGGTTTATCTCAAGCAAAATACTTCTTGGGGTATGATGTAGACGGAAGTAGCAAGATCATTCCAGTAGTTAAGAGTATAATAACTGGAGCAGATAAGTTTTCATGGCCACCTTTTGTGATGGGATCCATTATGCTTGCAATACTACTTGTCATGAAACACCTGGGAAAATCCAGAAAGTACTTAAGATTCTTGAGAGCTTCAGGTCCTCTTACAGCAGTAGTTCTGGGAACAATTTTTGCAAAAATAATTCATCCATCATCAATTTCTTTGGTGGGAGATATACCTCAAGGCCTACCAAAATTTTCTGTTCCAAAATCTTTTGAGTGTGCCCAGTCCTTAATTCCAACTGCTCTTCTCATAACTGGTGTGGCTATACTGGAATCAGTGGGAATTGCCAAGGCATTAGCAGCGAAAAATGGGTACGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTTTTTTCAGCATACCCCACAACAGGATCCTTTTCAAGGTCCGCTGTAAATCATGAAAGTGGTGCAAAATCTGGAGTATCTGCGATTGTTTCAGGAATTATAATGACCTGTGCACTTTTGTTTCTAACACCATTATTTGAGTACATACCTCAGTGTGCCCTTGCTGCCATTGTGATCTCTGCTGTGATAGGTCTGGTAGATTATGAGGAGGCCATTTTTTTGTGGCGTGTAGATAAGAAAGATTTTCTTCTTTGGACCATTACTAGCACTACAACATTGTTCCTTGGTATTGAGATTGGCGTCCTTATTGGGGTTGGGGTTTCACTTGCTTTTGTCATTCATGAGTCAGCAAATCCACATATTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTTTATAGGAATGTTAAACAGTATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTGTTGATGCTCCAATTTATTTTGCAAACACAAGTTACATAAAGGACAGGTTGCGTGAATATGAAGTTGATGTTGATAGTTCTACAAGACGTGGACCTGAGGTTGAAAGAATTTATTTTGTGATTCTAGAGATGGCACCTGTGACCTACATAGATTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAATTACGGGACATTCAGATTGCAATATCCAATCCGAGCCCAGAAGTTCTGCTTACCTTGTCTAGATCCGGTCTGGTGGAGTTGATAGGCAAAGAGTGGTACTTTGTGAGAGTACATGATGCTGTTCAAGTTTGCTTGCAACATGTTCAAAGCTTGAAAACGGGATCTACAAGTTCACAAACATCAATCTCTTCATTAGAAGACAAACCAAGTTTCTTTGCGCGATTATCAAAAGAGAGGGGGGAGAAGCTTTCAATTACAGATTTGGAGTCTGGTAATGGCAGGCCTCCACTCCCCAAGGAGAGAGATTCCCAATTGGAGCCATTGTTGTCTAAAGAACATTGA 2118 0.4443 MEITYASPSFSDLFAAAAASSSTMPSSARPVRIIPLQHPTATTSSPPPPPNVAFSRWTARLRRMTWLEWIEFFLPCLRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLGSIADSSTELYTELAILLSLMVGIMECTMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYDVDGSSKIIPVVKSIITGADKFSWPPFVMGSIMLAILLVMKHLGKSRKYLRFLRASGPLTAVVLGTIFAKIIHPSSISLVGDIPQGLPKFSVPKSFECAQSLIPTALLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSAIVSGIIMTCALLFLTPLFEYIPQCALAAIVISAVIGLVDYEEAIFLWRVDKKDFLLWTITSTTTLFLGIEIGVLIGVGVSLAFVIHESANPHIAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRVDAPIYFANTSYIKDRLREYEVDVDSSTRRGPEVERIYFVILEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPSPEVLLTLSRSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKTGSTSSQTSISSLEDKPSFFARLSKERGEKLSITDLESGNGRPPLPKERDSQLEPLLSKEH 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00547 705 Gene3D STAS domain 492 640 IPR036513 -
Pumo5g00547 705 MobiDBLite consensus disorder prediction 675 705 - -
Pumo5g00547 705 Pfam Sulfate permease family 89 462 IPR011547 GO:0016020
Pumo5g00547 705 CDD STAS_SulP_like_sulfate_transporter 513 629 - -
Pumo5g00547 705 ProSiteProfiles STAS domain profile. 512 636 IPR002645 -
Pumo5g00547 705 MobiDBLite consensus disorder prediction 686 705 - -
Pumo5g00547 705 SUPERFAMILY SpoIIaa-like 514 636 IPR036513 -
Pumo5g00547 705 NCBIfam sulfate permease 75 632 IPR001902 GO:0016020|GO:0055085
Pumo5g00547 705 FunFam Sulfate transporter 31 492 639 - -
Pumo5g00547 705 ProSitePatterns SLC26A transporters signature. 118 139 IPR018045 GO:0008271|GO:0008272
Pumo5g00547 705 PANTHER SULFATE TRANSPORTER 54 641 IPR001902 GO:0016020|GO:0055085
Pumo5g00547 705 Pfam STAS domain 513 632 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00547 Pumo-Chr5 11183618 11192029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00547 3 666 Inorganic Solute Cotransporters AT5G13550 72.470 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00547 K18059 - gmx:100794754 1241.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00547 5 11183618 11192029 Pumo5g00547 5 11183618 11192029 ECH