Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00529 ATGGCAACAAATGGTGAGACACCAGCGATAGGAATCAATTTAGGCACGACAAACTCATGCATTGCAATGTGGCGGCATGATCGAGTGGGGATCATTGTGAATGACCAAGGGAACAGAACAACACCCTCTTATGTTGCCTTCAACAACAACCAAAGGATGATTGGTGATGCTGCCAAGAACCAGGCTGCTACCAATCCAACCAACACTGTCTTTGATGCAAAGCGCCTAATTGGTAGGAGATTTAATGATCCCGTGGTTCAAAGTGACATGAAGCTATGGCCATTCAAAGTCATTGCTGATGTTAATGACAAACCAATGATTGCTGTTGATTACAATTCAATTGCATATCGCCTTGAAACGAAAAATTGTAATAATGAAAGGAGGAACGTTTTTGTGTTTGATCTTGGTGGGGGTACTTTGGATGTGTCTCTTCTTGTATTTGAAAAGGATGATATCCAAGTTAAGGCCATTGCTGGAGACACTCACCTTGGAGGAGAAGACTTTGATAACAATATGGTGAATTACTGTGTGAAGGAGTTTCAGAGGAAGTACAAAATGGACATTAGTGGTAACCCAAGAGCCATTAAGAGGCTGAGGACTGCTTGTGAGAAAGCAAAAAGGATACTCTCATCAACTACTGTCACCACCATTGAGCTAGACTCTTTGTACGATGGTATTAATTTCTACTCATCAATAACTCGTGCAAAGTTTGAGGAACTAAACAAGGACTACTTTAACAAGTGTATGGAGTTTGTAGAGAAGTGTCTAATGGATGCTAAGATGAACAAAAGTAAAGTTGATGATATTGTCCTTGTAGGTGGCTCTACTAGGATTCCCAAATTGCAGCTACTATTAAGCGACTTCTTTGATGGGAAGGATCTCCGCAAATGCATCAATGCTGATGAGGCTGTTGCATATGGTGCTGCTGTCCATGCTTCTATGTTGAATGGTGAGTTCAGTGAGAAGGTTCAAAACACTTTACTAAGGGAAGTCACTCCTTTGTCCCTTGGGTTGCAGACAGATGGAGGTATCATGAAAGTAATCATTCCTAGGAATACTAACATTCCCACAAAGATGGAAGATGTATTCACGACACATTTTGATAATCAAACCAGTATCTTGATTCATGTTTATGAGGGTGAGAGGCAAACAACTAGAGACAACAACTTGCTGGGTAAGTTTGTGCTTGAAATTCCTCCAGCTCGACGGGGTGTTCCTCGAATCAGTGTTTGCTTTGAACTTGATGATGATGGCATCCTACATGTCTCAGCCAAGGAAAAATCTAGGGGAATAACTAAGAAGATGACTATAACGAATGACAAAGGAAGGCTTTCGGAGAAAGAAATTGAGAGGATGATCTTAGAAGCAGAGAAGTACAAAGCTGATGATGAGATGTATAGGAAGAAGGTAGAAGCAAGACATGCATTGGAGAAGTATGCATACAGCATGAGGGATGCTATAAACAACAGGGAGATTAGTTTGAAGGTTTCTCCAGAAGACAAGAAAAAGATTAATGATGCAATTGATTGTGCCTTACAATGGCTTGATGTCAATGAGGATGCAAAACAAAAAGAATTTGACAACGTGAGGAGCACTCTTTCCAGAGTTTTTGATCCAGTTATTGTGAAGATGATAAAGGGGGAGGATAATGGTGTGCCACGAGGTGCTGGTAGCAATAGTGGGAAGAATCGCTTGTTATCAATATTGGTAAAATTTGCTCTCCAGGCAGTGTATTTCTACAAGTGA 1746 0.4078 MATNGETPAIGINLGTTNSCIAMWRHDRVGIIVNDQGNRTTPSYVAFNNNQRMIGDAAKNQAATNPTNTVFDAKRLIGRRFNDPVVQSDMKLWPFKVIADVNDKPMIAVDYNSIAYRLETKNCNNERRNVFVFDLGGGTLDVSLLVFEKDDIQVKAIAGDTHLGGEDFDNNMVNYCVKEFQRKYKMDISGNPRAIKRLRTACEKAKRILSSTTVTTIELDSLYDGINFYSSITRAKFEELNKDYFNKCMEFVEKCLMDAKMNKSKVDDIVLVGGSTRIPKLQLLLSDFFDGKDLRKCINADEAVAYGAAVHASMLNGEFSEKVQNTLLREVTPLSLGLQTDGGIMKVIIPRNTNIPTKMEDVFTTHFDNQTSILIHVYEGERQTTRDNNLLGKFVLEIPPARRGVPRISVCFELDDDGILHVSAKEKSRGITKKMTITNDKGRLSEKEIERMILEAEKYKADDEMYRKKVEARHALEKYAYSMRDAINNREISLKVSPEDKKKINDAIDCALQWLDVNEDAKQKEFDNVRSTLSRVFDPVIVKMIKGEDNGVPRGAGSNSGKNRLLSILVKFALQAVYFYK 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00529 581 FunFam Heat shock 70 kDa 164 247 - -
Pumo5g00529 581 FunFam heat shock 70 kDa protein-like 3 127 - -
Pumo5g00529 581 SUPERFAMILY Actin-like ATPase domain 125 316 IPR043129 -
Pumo5g00529 581 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 320 473 IPR029047 -
Pumo5g00529 581 FunFam Heat shock 70 kDa 320 473 - -
Pumo5g00529 581 Gene3D - 2 120 - -
Pumo5g00529 581 Gene3D Actin; Chain A, domain 4 167 246 - -
Pumo5g00529 581 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 471 549 IPR029048 -
Pumo5g00529 581 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 321 477 IPR029047 -
Pumo5g00529 581 Gene3D - 123 295 - -
Pumo5g00529 581 ProSitePatterns Heat shock hsp70 proteins family signature 2. 132 145 IPR018181 -
Pumo5g00529 581 Gene3D - 474 546 IPR029048 -
Pumo5g00529 581 PANTHER HEAT SHOCK PROTEIN 70KDA 113 508 IPR013126 GO:0005524|GO:0140662
Pumo5g00529 581 SUPERFAMILY Actin-like ATPase domain 9 112 IPR043129 -
Pumo5g00529 581 Pfam Hsp70 protein 9 111 IPR013126 GO:0005524|GO:0140662
Pumo5g00529 581 Pfam Hsp70 protein 113 544 IPR013126 GO:0005524|GO:0140662
Pumo5g00529 581 PRINTS 70kDa heat shock protein signature 405 421 - -
Pumo5g00529 581 PRINTS 70kDa heat shock protein signature 325 344 - -
Pumo5g00529 581 PRINTS 70kDa heat shock protein signature 8 21 - -
Pumo5g00529 581 PRINTS 70kDa heat shock protein signature 298 318 - -
Pumo5g00529 581 PRINTS 70kDa heat shock protein signature 266 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00529 Pumo-Chr5 10946856 10951049 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00529 113 547 Calmodulin-binding Proteins AT3G12580 63.303 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00529 K03283 - gmx:100783822 752.666