Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00528 ATGGCAGCAAAGGGTGAGACACCGGCGATAGGAATCGATTTAGGCACAACAAACTCGTGCGTTGGAGTGTTCCGACATGACCAGGTGGAAATCATCGAGAATGAGCAAGGTCACAGAACAACACCCTCTTATGTTGCCTTCACTGACACCGAAAGAATAATTGGTGATGCTGCTAAGAATCAGGCTGCTATCAACTCAGCCAACACTGTCTTTGGTAAAATAGCTAAACCTATATGTTTTGCTTATGATGCAAAGCGGCTAATTGGTAGGAAATTTAGTGACCCCGTGGTTCAGAGTGATATGAAGCTATGGCCATTCAAAGTTGTTGCTGACAATAATGACAAACCAATGATTGCAGTTTATTACAACTGTGAGAAGAAGCACTTTTATGCAGAACAAATATCATCCATGGTTTTGGCTAAGATGCGAGAGACTGCAGAGTCATTCCTTGGATCAACAGTGGAGAATGCTGTTATCACTGTGCCTGCTCACTTCAATGCCTCTCAGCGTCAAGCTACCAAAGATGCTGGTGTTAATGCTGGCCTCAATGTTTTGCAAATAATGGATGAGGCCACTGCTGCAGCAACTGCATATTATCTTCAAATGAAATATCGTAATCATGAAAGGAGGAATGTGTTTGTGTTTGATCTTGGTGGTGGTACTTTGGATGTGTCTCTTCTTGCATTGGAGAAGGATGATATCCAATTGAAGGCCCTTGCTGGAGGCGCTAACCTTGGAGGAGAGGACTTTGATAACAATATGGTAAATTACTGTGTGAAGGAGTTTCAGAGAAAGTACAAAATGGACATTAGTGGAAACCCAAGAGCACTCAGGAGGTTGAGGAGTGCTTGTGAGAGTGCAAAGAGGACACTTTCAAGCACCACTGTGACCACCATTGAGTTAGATTGTTTGTATCAAGGTATTGATTTTTCCTCATCAATAAGTCGCAAAAAGTTTGAGGAACTCAACGAGTACCACTTTAACAAGTGTATGGAGTATGTGGAGAAGTGTCTGATGGATGCTAAGATGGACAAGTGTAGGGTTCATGATGTTGTCCTGGTGGGTGGATCTACAAGGATTCCCAAAGTGCAGGAACTATTAAGGGACTTCTTTGATGGGAAGAATCTCTGCAAAAGCATCAGTGCTGATGAGGCTGTTGCATATGGTGCTGCTGTCCGTGCTTCTATGTTGAGTGGTGAGTTCAATGAGAAGCTTCAAAACAGTACTACACTGAGGAAAGTCACAGTCACAGTCACTCCCCAGTCCCTTGGGTTTCATGAAGATAGGAAGAATGTAGAAGCAAGGCAGGCATTGGAGAAGTATGCATACAGCATAAGGAATGCTATAAACAACAAGGAGATTAGCTTGAGGCTTTCTTCAGAAGACAAGATGATGAAGGGGGAGAATAATGTTGTGCATGCTCCACGTGTTGATGCTTGCTCTGAATGCTACCAAAGGAAGGGGGAGGATAATGTTGTGCCAGCTCCACGTGTTGATGCTTGCTCTGAATGCTACCAAAGGAAGGGGGAGGATAATGTTGTGCCAGCTCCACGTGTTGTTGCTTGCTCTGTATGCTGCCAAAGGAAGGGGGAGGATAATGTTGTGTCAGCTCCACGTGTTGTTGCTCAATCTGGTAGCAATGAAAGGAACAGGAATGGAGGTGTACCAGCTGGTGTTGGTGTTGCCTTGAATATCTGTCTTGCTGCAGCATGTTCGTTAATCACAGGTGATATCAGTCATTTGTTGAATAATTGGGGGGGAGGGGGACAATGA 1773 0.4422 MAAKGETPAIGIDLGTTNSCVGVFRHDQVEIIENEQGHRTTPSYVAFTDTERIIGDAAKNQAAINSANTVFGKIAKPICFAYDAKRLIGRKFSDPVVQSDMKLWPFKVVADNNDKPMIAVYYNCEKKHFYAEQISSMVLAKMRETAESFLGSTVENAVITVPAHFNASQRQATKDAGVNAGLNVLQIMDEATAAATAYYLQMKYRNHERRNVFVFDLGGGTLDVSLLALEKDDIQLKALAGGANLGGEDFDNNMVNYCVKEFQRKYKMDISGNPRALRRLRSACESAKRTLSSTTVTTIELDCLYQGIDFSSSISRKKFEELNEYHFNKCMEYVEKCLMDAKMDKCRVHDVVLVGGSTRIPKVQELLRDFFDGKNLCKSISADEAVAYGAAVRASMLSGEFNEKLQNSTTLRKVTVTVTPQSLGFHEDRKNVEARQALEKYAYSIRNAINNKEISLRLSSEDKMMKGENNVVHAPRVDACSECYQRKGEDNVVPAPRVDACSECYQRKGEDNVVPAPRVVACSVCCQRKGEDNVVSAPRVVAQSGSNERNRNGGVPAGVGVALNICLAAACSLITGDISHLLNNWGGGGQ 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00528 590 SUPERFAMILY Actin-like ATPase domain 208 399 IPR043129 -
Pumo5g00528 590 Gene3D - 425 472 IPR029048 -
Pumo5g00528 590 Gene3D Actin; Chain A, domain 4 246 329 - -
Pumo5g00528 590 SUPERFAMILY Actin-like ATPase domain 8 201 IPR043129 -
Pumo5g00528 590 Pfam Hsp70 protein 9 403 IPR013126 GO:0005524|GO:0140662
Pumo5g00528 590 Gene3D - 71 137 - -
Pumo5g00528 590 Gene3D - 203 377 - -
Pumo5g00528 590 FunFam heat shock 70 kDa protein-like 82 137 - -
Pumo5g00528 590 ProSitePatterns Heat shock hsp70 proteins family signature 3. 351 365 IPR018181 -
Pumo5g00528 590 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pumo5g00528 590 FunFam heat shock 70 kDa protein 14 246 329 - -
Pumo5g00528 590 Gene3D - 10 394 - -
Pumo5g00528 590 PANTHER HEAT SHOCK PROTEIN 70KDA 9 425 IPR013126 GO:0005524|GO:0140662
Pumo5g00528 590 FunFam Heat shock cognate 70 kDa protein 2 330 377 - -
Pumo5g00528 590 ProSitePatterns Heat shock hsp70 proteins family signature 2. 214 227 IPR018181 -
Pumo5g00528 590 FunFam Molecular chaperone DnaK 10 204 - -
Pumo5g00528 590 PRINTS 70kDa heat shock protein signature 348 364 - -
Pumo5g00528 590 PRINTS 70kDa heat shock protein signature 380 400 - -
Pumo5g00528 590 PRINTS 70kDa heat shock protein signature 220 230 - -
Pumo5g00528 590 PRINTS 70kDa heat shock protein signature 8 21 - -
Pumo5g00528 590 PRINTS 70kDa heat shock protein signature 36 48 - -
Pumo5g00528 590 PRINTS 70kDa heat shock protein signature 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00528 Pumo-Chr5 10918288 10923016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00528 1 463 Calmodulin-binding Proteins AT5G02500 64.363 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00528 K03283 - gmx:100783822 582.022