Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00526 ATGACCATTCAAGAAATTGGTTATCAAGAAAGCTCATGGCAGATGCATTTCTGGGCAATGACTTCTTTGCTAGTTGATCTTTCAGCTGTTTGTCATTCAGGTCATGAATTAAGCAGAAAAGCTGAGTTCACCGCCAAAGAAGATTTGCCCGGCAATTCCAAAGGAAATTGCCAACATGCGAAGTGGCTAATTGGCAGGAAATTTAGTGACCCTGTGGTTCAGAGTGATATCAAGCTATGGCAGTTCAAAGTCATTGGTGGTGTTGATGACAAACCAATGATTGTTGTTAATTACAATGGTGGGGAAAAGTCTTTTTCTGCAGAAGAAATTTCATCCATGGTTTTGGTAAAGATGCGTGAGATTGCAGAGTCATTCCTTGGATCAACAGTGAAGAATGCTGTTATCACTGTGCCCGCTTACTTCAATGACTCTCAGCATCAAGCTACCAAAGATGTCGGTGCCATTGCTGGCCTCAATGTTTTGAAGATCATCAATGAACCTAGTGCTGCAGCAATAGCATATTGCCTTGAAATAAAAAATTGTAATAATGAAAGGAGAAATGTTTTTGTGTTTGATCTTGGTGGGGGTACTTTGGATGTGTTTCTTCTTGTACTTGAGAAGGATGATATCCAAGTTAAGGCCATTGCTGGAGACACTCACCTTGGGGGAGAGGACTTTGACAACAACACGGTAAAGTACTTTGTGAAAGAATTCCAGAGAAAAAACAAAATGAACATTAGTGGAAACCCAAGGGCCCTTAGAAGGTTGAGGACTGCTTGTGAGAAAGCAAAAAGGACACTCTCATCCATTATGGTGACCACCATTGAAGTAGACTCTTTGTACGAGGGTATTGATTTTTACTTATCAATAAGTTGTGCAAAGTTTGAGGAACTCAACAAGGAATACTTTAACAAGTGTATGGTGTTTGTGGAGAAGTGTCTGGTGGATGCTAAGATGGACAAGAGTAGTGTTGATGATGTTGTTTTGGTAGGTGGATCTACAAGGATTCCCAAAGTGCAGCAACTATTAAGTGACTTCTTTGATGGGAAGGATCTCTGCAAATGCATCAATGCTGATGAGGCTATTGCATATGGTGCTGCTGTCCATGCTACTAGGTTGAGTGGTGTGTTGAATGAGAAGCTTCAAAATACTTTACTGAGGGAAGTCACTCCTTTATCCCTTGGGTTGGAGTTAAAGGGAGGTATCATGAAAATAATCATTCCTAGGAATACTAGCATTCCTACAAAGATGGAAGATGTAATAACGACAATTGTTGATAATCAAGCCAGTCTCTTGATTCAAGTTTACGAGGGTGAGAGGCAAACAACTAAAGACAACAACTTGCTGGGTAAATTTGAGCTGGAAATTCCTCCAACTCCGCGGGGTGTTCCTGAAATCAGTGTTTGCTTTGAAATTGATGCTCATGGCATCCTACACGTCTCTGCTAAGGAAAGTTCTAGGGGAACAACCAAGAAGGTGACAATAATAAATGACAAAGGAGCTTTCAAAGGAAGAAATAGAGAGGATGATCTCGGAAGCCGAGAAGTACAAGTTATTGCAAAGGTGATAAATGATGAGGATAACGGTGATGTTGCTTCCTCTAGTAGCGATCATGGGAAGAGTCGCTGGTTTCCAAAATTGGCAAAATTTGCTCTCCAAGCAGCATATGTAGCTGTTACAGGTGATATCAGTAAGTTTTCAGTTAGGATATTATTTGAAAAATGTCTTGGTGCTTCAGTTAGGAATTAG 1749 0.4054 MTIQEIGYQESSWQMHFWAMTSLLVDLSAVCHSGHELSRKAEFTAKEDLPGNSKGNCQHAKWLIGRKFSDPVVQSDIKLWQFKVIGGVDDKPMIVVNYNGGEKSFSAEEISSMVLVKMREIAESFLGSTVKNAVITVPAYFNDSQHQATKDVGAIAGLNVLKIINEPSAAAIAYCLEIKNCNNERRNVFVFDLGGGTLDVFLLVLEKDDIQVKAIAGDTHLGGEDFDNNTVKYFVKEFQRKNKMNISGNPRALRRLRTACEKAKRTLSSIMVTTIEVDSLYEGIDFYLSISCAKFEELNKEYFNKCMVFVEKCLVDAKMDKSSVDDVVLVGGSTRIPKVQQLLSDFFDGKDLCKCINADEAIAYGAAVHATRLSGVLNEKLQNTLLREVTPLSLGLELKGGIMKIIIPRNTSIPTKMEDVITTIVDNQASLLIQVYEGERQTTKDNNLLGKFELEIPPTPRGVPEISVCFEIDAHGILHVSAKESSRGTTKKVTIINDKGAFKGRNREDDLGSREVQVIAKVINDEDNGDVASSSSDHGKSRWFPKLAKFALQAAYVAVTGDISKFSVRILFEKCLGASVRN 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00526 582 PRINTS 70kDa heat shock protein signature 133 153 - -
Pumo5g00526 582 PRINTS 70kDa heat shock protein signature 463 479 - -
Pumo5g00526 582 PRINTS 70kDa heat shock protein signature 356 376 - -
Pumo5g00526 582 PRINTS 70kDa heat shock protein signature 383 402 - -
Pumo5g00526 582 PRINTS 70kDa heat shock protein signature 324 340 - -
Pumo5g00526 582 PRINTS 70kDa heat shock protein signature 196 206 - -
Pumo5g00526 582 FunFam Endoplasmic reticulum chaperone BiP 89 194 - -
Pumo5g00526 582 Gene3D Actin; Chain A, domain 4 222 305 - -
Pumo5g00526 582 Gene3D - 58 113 - -
Pumo5g00526 582 Gene3D - 44 369 - -
Pumo5g00526 582 SUPERFAMILY Actin-like ATPase domain 183 375 IPR043129 -
Pumo5g00526 582 Gene3D - 179 353 - -
Pumo5g00526 582 FunFam heat shock 70 kDa protein-like 59 113 - -
Pumo5g00526 582 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 379 503 IPR029047 -
Pumo5g00526 582 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 370 516 IPR029047 -
Pumo5g00526 582 PANTHER HEAT SHOCK PROTEIN 70KDA 56 524 IPR013126 GO:0005524|GO:0140662
Pumo5g00526 582 Pfam Hsp70 protein 44 501 IPR013126 GO:0005524|GO:0140662
Pumo5g00526 582 ProSitePatterns Heat shock hsp70 proteins family signature 3. 327 341 IPR018181 -
Pumo5g00526 582 SUPERFAMILY Actin-like ATPase domain 44 178 IPR043129 -
Pumo5g00526 582 FunFam Heat shock 70 kDa 222 305 - -
Pumo5g00526 582 FunFam Heat shock 70 kDa protein 377 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00526 Pumo-Chr5 10907303 10911594 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00526 45 500 Calmodulin-binding Proteins AT3G12580 68.490 0.0 639