Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00525 ATGGCAACAAATGGTGAGACACCTACGATAGGAATCGATTTAGGCCCGACATACTCATGCATTGCAGTGTGGCGGCATGATCGAGTGGAGATCATGGTGAACGACCAAGGGAACAGAACAACACCCTCTTATGTTGCCTTCAACAACAACCAAAGGATGATTAGTGATGCTGCCAAGAACCAGGTTGCTACCAATCCAACCAACACTGTCTTTGATGCAAAGCGCCTAATTGGTAGGAGATTTAGTGATCCCGTGGTTCAAAGTGATATGAAGCTATGGCCATTCAAAGTCATTGCTGATGTTAATGACAAACCAATGATTGCTGTTGATTACAATTGTGAGGAAAAGCACTTTTATGCAGAACAAATTTCGTCCATGGTTTTGGCTAAGATGCTGAGCAATGCTGTTATCACTGTGCCTGCTTACTTCAATGTCTCTCAGCGCCAAGCTACTAAGGATGCTGGTGTCATTGCTGGCCTCAATGTTTTGCGAATCATCAATGAGCCCACTGCTGCAGCAATTGCATATCGCCTTGAAATGAAAAATTGTCATAGTGAAACGAGGAACGTTTTGTGTTTGATCTTGGATGATATCCAAGTTAAGGCCATTGCTGGAGACACTCACCTTGGAGAAGACTTTGATAACAATATGGTGAATTACAGTGTGAAGGAGTTTCAGAGGAAGTACAAAATGGACATTAGTGGTAACCCAAGAGCCATTAGGAGGCTGAGGACTGCTTGTGAGAAAGCAAAAAGGATACTCTCATCAACTACTGTCACCACCATTGAGCTAGACTCTTTGTACGATGGTATTGATTTCTACTCATCAATAACTCGTGCAAAGTTTGAGGAACTCAACAAGGAATACTTTAACAAGTGTATGGAGTTTGTAGAGAAGTGTCTAATGGATACTAAGATGAACAAAAGTAAAGTTGATGATGTTGTCGTTGTAGGTGGCTCTACTAGGATTCCCAAATTGCAGCTACTATTAAGCGACTTCTTTGATGGGAAGGATCTCCGCAAATGCATCAATGCTGATGAGGCTGTTGCATATGGTGCTGCTGTCCATGCTTCTATGCTGAATGGTGAGTTGAGTGAGAAGGTTCAAAACACTTTACTAAGGGAAGTCACTCCTTTGTCCCTTGGGTTGCAGACAGATGGAGGTATCATGAAAGTAATCATTCCTAGGAATACTAACATTCCCACAAAGATGGAAGATGTATTCACGACACATTTTGATAATCAAACCAGTGTCTTGATTCATGTTTATGAGGGTGAGAAGCAAACAACTAGAGACAACAACTTGCTGGGTAAGTTTGTGCTTGAAATTCCTCCAGCTCGGCGGGGTGTTCCTCGAATCAGTGTTTGCTTTGAACTTGATGATGATGGCATCCTGCATGTCTCAGCCAAGGAAAAATCTAGGGGAATAACCAAGAAGGTGACCATAACAAATGACAAAGGAAGGCTTTCGGAGAAAGAAATTGAGAGGATGATCTTAGAAGCAGACAAGTACAAAGCTGATGATGAGATGTATAAGAAGAAGGTAGAAGCAAGGCATGCATTGGAGAAGTATGCATACAACATGAGGGATGCTATAGACAACAAGGAGATTAGTTTGAAGGTTTCTCCAGAAGACAAGAAAAAGATCAATGATGCAATTGATTGTGCCTTACAATGGCTTGATGTCAATGAGGATGCAAAACAAAAAGAATTTGACAACATGAGGAGCACTCTTTCTAGAGTTTTTGATCCAGTTATTGTGAAGATGATAAAGGGGGAGGATAATGGTGTGCCACGAGGTGCTGGTAGCAATAGTGGGAAGAATCGCGTGTTATCAATATTGGTAAAATTTGCTCTCCAGGCAGTGTATTCAGCTGTTACAGGTGATATCATTGGGTTTGCTTCTGTGGTTGTTGACTGTTTATCAAATTAA 1932 0.4156 MATNGETPTIGIDLGPTYSCIAVWRHDRVEIMVNDQGNRTTPSYVAFNNNQRMISDAAKNQVATNPTNTVFDAKRLIGRRFSDPVVQSDMKLWPFKVIADVNDKPMIAVDYNCEEKHFYAEQISSMVLAKMLSNAVITVPAYFNVSQRQATKDAGVIAGLNVLRIINEPTAAAIAYRLEMKNCHSETRNVLCLILDDIQVKAIAGDTHLGEDFDNNMVNYSVKEFQRKYKMDISGNPRAIRRLRTACEKAKRILSSTTVTTIELDSLYDGIDFYSSITRAKFEELNKEYFNKCMEFVEKCLMDTKMNKSKVDDVVVVGGSTRIPKLQLLLSDFFDGKDLRKCINADEAVAYGAAVHASMLNGELSEKVQNTLLREVTPLSLGLQTDGGIMKVIIPRNTNIPTKMEDVFTTHFDNQTSVLIHVYEGEKQTTRDNNLLGKFVLEIPPARRGVPRISVCFELDDDGILHVSAKEKSRGITKKVTITNDKGRLSEKEIERMILEADKYKADDEMYKKKVEARHALEKYAYNMRDAIDNKEISLKVSPEDKKKINDAIDCALQWLDVNEDAKQKEFDNMRSTLSRVFDPVIVKMIKGEDNGVPRGAGSNSGKNRVLSILVKFALQAVYSAVTGDIIGFASVVVDCLSN 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00525 643 SUPERFAMILY Actin-like ATPase domain 9 179 IPR043129 -
Pumo5g00525 643 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 366 522 IPR029047 -
Pumo5g00525 643 PANTHER HEAT SHOCK PROTEIN 70KDA 10 553 IPR013126 GO:0005524|GO:0140662
Pumo5g00525 643 Gene3D - 10 357 - -
Pumo5g00525 643 Gene3D - 71 126 - -
Pumo5g00525 643 FunFam Heat shock 70 kDa 365 518 - -
Pumo5g00525 643 SUPERFAMILY Actin-like ATPase domain 198 360 IPR043129 -
Pumo5g00525 643 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 365 517 IPR029047 -
Pumo5g00525 643 FunFam Heat shock 70 kDa 209 292 - -
Pumo5g00525 643 Gene3D - 181 340 - -
Pumo5g00525 643 Gene3D Actin; Chain A, domain 4 210 292 - -
Pumo5g00525 643 Pfam Hsp70 protein 10 589 IPR013126 GO:0005524|GO:0140662
Pumo5g00525 643 Gene3D - 518 591 IPR029048 -
Pumo5g00525 643 FunFam heat shock 70 kDa protein-like 71 126 - -
Pumo5g00525 643 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 516 594 IPR029048 -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 58 66 - -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 36 48 - -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 343 363 - -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 311 327 - -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 135 155 - -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 370 389 - -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 8 21 - -
Pumo5g00525 643 PRINTS 70kDa heat shock protein signature 450 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00525 Pumo-Chr5 10838992 10843085 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00525 1 592 Calmodulin-binding Proteins AT3G12580 63.651 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00525 K03283 - gmx:100783822 999.579