Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00524 ATGGCAACAAATGGCGAGACACCTGCGATAGGAATCGATTTAGGCACGACATACTCATGCATTGCAGTGTGGCGGCACGATCGAGTGGAGATCATTGTGAATGACCAAGGGAACAGAACAACACCCTCTTATGTTGCCTTCAACAACAACCAAAGGATGATTGGTGATGCTGCCAAGAACCAGGCTGCTACCAATCCAACCAACACTGTCTTTGATGCAAAGTGCCTAATTGGTAGGAGATTTAGTGATCCAGTGGTTCAAAGTGATATGAAGCTATGGCCATTCAAAGTCATTGCTGATGTTAATGACAAACCAATGATTGCTGTTGATTACAATTGTGAGGAAAAGCACTTTTATGCAGAACAAATTTCATCCATGGTTTTGGCTAAGATGCGTGAGACTGCAGAGTCTTTCCTTGGATCAACAGTGAGCAATGTTATTATCACTATGCCCGCTTACTTTAATGACTCTCAGCGTCAAGCTACCAAAGATGCTGGGGTCATTGCTGGCCTCAATGTTTTGCGAATCATCAATGAGCCCACTGCTGCAGCAATTGCATATCGCCTTGAAATGAAGAATTGTAATAATGAAAGGAGGAACGTTTTTGTGTTTGATCTTGGTGGGGGTACTTTGGATGTGTCTCTTCTTGCATTGGAGAAGGATGATATCCAAGTTAAGGCCATTGCTGGAGACACTCACCTTGGAGGAGAAGACTTTGATAACAATATGGTGAATTACTGTGTGAAGGAGTTTCAAAGGAAGTACAAAATGGACATTAGAGGTAACCCAAGAGCCATTAGGAGGCTGAGGACTGCTTGTGAGAAAGCAAAAAGGATACTCTCATCAACTACTATCACCACCATTGAGCTAGACTCTTTGTACGATGGTATTGATTTCTTCTCATCAATAACTCGTGCAAAGTTTGAGGAACTCAACAAGGACTACTTTAACAAGTGTATAGAGTTTGTAGAGAAGTGTCTAATGGATACTAAGATGGACAAAAGTAAAGTTGACGATGTTGTCCTTGTAGGTGGCTCTACTAGGATTCCCAAATTGCAGCAACTCTTAAGTGATTTCTTTGATGGGAAGGATCTCCGCAAATGCATCAATGCTGATGAGGCTGTTGCATATGGTGCTGCTGTCCATGCTTCTATGTTGAATGGTGAGTTCGGTGAGAAGGTTCAAAACACTTTACTAAGGGAAGTGACTCCTTTGTCCCTTGGGTTGCAGACAGATGGAGGTATCATGAAAGTAATCATTCCTAGGAATACTAACATTCCCACAAAGATGGAAGATGTATTCACAACACATTTTGATAATCAAACCAACATCTTGATTCATGTTTATGAGGGAGAGAGGCAAACAACTAGAGACAACAACTTGCTGGGTAAGTTTGTGCTAGAAATTCCTCCAGCTCAGCGGGGTTTTCCTCAAATCAGTGTTTGCTTTGAACTTGATGATGATGGCATCCTACATGTCTCAGCCAAGGAAAAATCTAGGGGAATAACCAAGAAGGTGACCATAACAAATGACAAAGGAAGGCTTTCGGAGAAAGAAATTGAGAGGATGATCTTAGAAGCAGACAAGTACAAAGCTGATGATGAGATGTACAAGAAGAAGGTAGAAGCAAGGCATGCATTGGAGAAGTATGCATACAACATGAGGAATGCTATAGACAACAAGGAGATTAGTTTGAAGGTTTCTCCAGAAGACAAGAAAAAGATCAATGATGCAATTGATTGTGCCTTACAATGGCTTGATGTCAATGAGGATGCAAAACAAAAAGAATTTGACAACATGAGGAGCACTCTTTCTAGAGTTTTTGATCTAGTTATTGTGAAGATGATAAAGGGGGAGGATAATGGTGTTCCACGAGGTGCTGGTAGCAATAGTGGGAGCGTGTTATCAATATTGGCAAAATTTGCTCTCCAGGCAGTGTATTCAGCTGTTACAGGTGATATCATTGGGTTTGCTTCTGTGGTTGTTGACTGCTTGTCAAATTAA 2004 0.4137 MATNGETPAIGIDLGTTYSCIAVWRHDRVEIIVNDQGNRTTPSYVAFNNNQRMIGDAAKNQAATNPTNTVFDAKCLIGRRFSDPVVQSDMKLWPFKVIADVNDKPMIAVDYNCEEKHFYAEQISSMVLAKMRETAESFLGSTVSNVIITMPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYRLEMKNCNNERRNVFVFDLGGGTLDVSLLALEKDDIQVKAIAGDTHLGGEDFDNNMVNYCVKEFQRKYKMDIRGNPRAIRRLRTACEKAKRILSSTTITTIELDSLYDGIDFFSSITRAKFEELNKDYFNKCIEFVEKCLMDTKMDKSKVDDVVLVGGSTRIPKLQQLLSDFFDGKDLRKCINADEAVAYGAAVHASMLNGEFGEKVQNTLLREVTPLSLGLQTDGGIMKVIIPRNTNIPTKMEDVFTTHFDNQTNILIHVYEGERQTTRDNNLLGKFVLEIPPAQRGFPQISVCFELDDDGILHVSAKEKSRGITKKVTITNDKGRLSEKEIERMILEADKYKADDEMYKKKVEARHALEKYAYNMRNAIDNKEISLKVSPEDKKKINDAIDCALQWLDVNEDAKQKEFDNMRSTLSRVFDLVIVKMIKGEDNGVPRGAGSNSGSVLSILAKFALQAVYSAVTGDIIGFASVVVDCLSN 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00524 667 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Pumo5g00524 667 Gene3D - 192 366 - -
Pumo5g00524 667 FunFam Heat shock 70 kDa 235 318 - -
Pumo5g00524 667 FunFam Heat shock protein 70 10 201 - -
Pumo5g00524 667 SUPERFAMILY Actin-like ATPase domain 8 190 IPR043129 -
Pumo5g00524 667 SUPERFAMILY Actin-like ATPase domain 198 386 IPR043129 -
Pumo5g00524 667 Gene3D Actin; Chain A, domain 4 235 318 - -
Pumo5g00524 667 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 548 IPR029047 -
Pumo5g00524 667 Gene3D - 71 126 - -
Pumo5g00524 667 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Pumo5g00524 667 FunFam heat shock 70 kDa protein-like 71 126 - -
Pumo5g00524 667 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 543 IPR029047 -
Pumo5g00524 667 Gene3D - 544 617 IPR029048 -
Pumo5g00524 667 Gene3D - 10 383 - -
Pumo5g00524 667 FunFam Heat shock 70 kDa 391 544 - -
Pumo5g00524 667 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Pumo5g00524 667 PANTHER HEAT SHOCK PROTEIN 70KDA 9 579 IPR013126 GO:0005524|GO:0140662
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 8 21 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 146 166 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 58 66 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 337 353 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 36 48 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 396 415 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 476 492 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 369 389 - -
Pumo5g00524 667 PRINTS 70kDa heat shock protein signature 209 219 - -
Pumo5g00524 667 Pfam Hsp70 protein 9 609 IPR013126 GO:0005524|GO:0140662
Pumo5g00524 667 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 542 620 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00524 Pumo-Chr5 10803741 10808291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00524 1 618 Calmodulin-binding Proteins AT3G12580 67.367 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00524 K03283 - gmx:100783822 1091.26