Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00515 ATGGGGACAAGGTTTGGTGACCCTGCACCAGTAATGGCAGCATTTTCTTCTAGAGGACCAAGCCTAGTGGGACCAGATGTCATTAAGCCTGATGTGACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCAGCCAAAATTAGCCCAAGCTTTCTCATGAGTGACAAAAGAAAAGTACTATTTAACATACTTTCAGGTACTTCAATGTCTTGTCCTCATGTTAGTGGCATTGCAGCACTGCTCAAGTCTTTGCACAAAGATTGGTCCCCTGCAGCCATCAAATCTGCTCTGATGACTACAGCTTACACATTGAACAACAAAGGAGCTCCAATTTCAGACATGGCCTCAAATAACTCACCATTTGCTACCCCCTTTGTATTTGGTTCAGGCCATGTTAACCCTGTAAGTGCATCTGATCCAGGGTTAGTCTATGATATCAGCACCAAAGACTACTTAAATTATTTATGCAGCCTAAACTATACCTCTTCCCAGATTGCTTTATTATCAAGAGGAAAATTTGTATGTTCTAAAAAAGCAGTTCTTCAAGCTGGTGACTTAAACTACCCTTCATTTGCTGTTCTATTTGGCAGAAATGCCTTAAATGCTAGTGTGACATACAGGAGGGTTGTAACAAATGTTGGAAAACCCCAAAGTGCTTATGCAGTGAAAGTGGAACAGCCAAATGGAGTTTCAGTTACTGTTGAACCAAGGAAATTGAAGTTTGAAAAAGTGGGTCAGAAATTGAGCTACAAGGTGACATTTTTGGCAATTGGAGGAGCAAGAGTTGCAGGCATCATGGTCTTTAGGATAGTTTTCCTATTTCTGGCTTTTATGGTGACAAATTCAATAGCTGTCGCGGACCAACAGACATACATAGTACACATGGACAAGACCAAGCTCGAAGCCTCAATTCATTCTCAAGACAGCTCAAAACCATGGTCTGAATCAATCATTGATTTCATTTCTGAAGATTCAATGCAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATTTTAGCCCCTCAACTCCTTTGCACCTATGAAGCCAGCATGTTTGGTTTTGCTGCCCAGCTTTCCAAGAAACACCTTAAATACTTGAACCAAGTTGATGGTTTCCTCTCAGCCATACCTGATGAACTATCAACCCTCCACACAACATGCACCCCACACTTTCTTGGCATAAACAATGGAAGTGCACTTTGGAGTGCTTCTAACTTGGCCACAGATATGATTATTGGGGTTATGGATTCAGGAATATGGCCTGAACACATCAGTTTCGAAGACTCAGACTTGTCCCCAGTACCTTCTCATTGGAAAGGTGTTTGTGAACCAGGCACCAATTTCTCTGCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGAACCTATTTCAAGGGGTATGAAAAAGCTTTTGGAAAATTAAATGAAACAGTGAGTTATCTTTCCCCAAGAGATTCCGAAGGGCATGGAACACACACTGCCTCAACTGCAGCTGGTAATGTGGTGAAAAATGCCAACCTTTTTGGCCAGGCTAGAGGCACAGCAAGTGGAATGAGGTATACCTCAAGAATTGCAGTTTATAAAGTATGCTGGCCAAAAGGTTGTGTTAACTCTGACATATTAGCCGCGCTGGACCAAGCAGTTTCTGATGGGGTTGATGTATTGTCACTCTCTTTAGGGAGTGATCCCAAACCTTTTTATGAAGATTTAATCGCCATAGCTTCATTTGGGGCAACCAAGAAAAGGGTTTTTGTTGCTTGTTCTGCAGGCAACGAGGGCCCCTCTCCATCAACAGTTTCGAAATGCTGCTCCATGGATCATGACAGTACAAAAGAGGAAGCACAGTATTGCAGCGAAGGCTCCCTTGATTCAAAGCTTGTGCAAGGGAAAATAGTTGTTTGTGAAAGAGGAATAAATGGTAGAAATGAAAAGGGAGAGGTAGTGAAAGTGGCAGGTAGGGCAGGAATGATAATACTTAACTCTGAAAATCAAGGAGAAGAAATTTTTGCTGAAGTTCATATTTTGCCAGCCACTTCCTTAGGGGCTTCAGCAAGTAAGATTATTAGAAGCTATGTTCAATCTGATAAAAAACCAACAGCTTCAATTTCCTTTTTGGGGACAAGGTTTGGTGACCCTGCACCAGTAATGGCAGCATTTTCTTCTAGAGGACCAAGTATAGTGGGACCAGATATGATCAAGCCAGATGTGACTGCACCTGGTGTGAACATCTTGGCTGCTTGGCCACCCAAAACTAGCCCAAGTTATGTCATGAATGACAAAAGAGAAGTACTATTTAACATTCTCTGGGGTACCTCAATGTCTTGTCCTCATGTTAGTGGCGTAGCAGCACTGCTTAAGTCTTTGCATAAGGATTGGTCCCCTGCAGCTATCAAATCTGCTTTGATGACTACTGCTTACACATTGAACAACAAAGGAGCTCCAATTTCAGACTTGGCCTCAGATAACTCAGCATTTGCTACCCCCTTTGCATTTGGTTCTGGCCATGTTAACCCTGTAAGTGCTTCTGATCCAGGGTTAGTCTATGATATCAGCACCGAAGACTACCTAAATTATTTATGCAGCCTAAACTATACCTCTTCCCAGATTGCTTTATTATCTAGAGGTAAATTTGTATGTTCTAAAAAGGCAGTTCTTCAAGCTGGTGACTTGAACTACCCTTCATTTTCTGTTCTATTTGGCAAAAGTGCCTTAAATGCTAGTGTGACATACAGGAGGGTTGTCACAAATGTTGGAAAACCCCAAAGTGCTTATGCAGTTAAAGTGGAACAGCCAAATGGAGTTTCAGTTACTGTTGAACCAAGGGTATTAAATTTTGAAAAAGTGGGTCAGAAATTGAGCTACAAGGTGACATTTGTGGCAATTGGAAAAGCAAGAGTTGCTGGTACCTCATCATTTGGGTCACTGGTTTGGGTATCTGGCAGATATCTAGTTAGAAGTCCTATAGCAGTTACCTGGATATAG 3000 0.4187 MGTRFGDPAPVMAAFSSRGPSLVGPDVIKPDVTAPGVNILAAWPAKISPSFLMSDKRKVLFNILSGTSMSCPHVSGIAALLKSLHKDWSPAAIKSALMTTAYTLNNKGAPISDMASNNSPFATPFVFGSGHVNPVSASDPGLVYDISTKDYLNYLCSLNYTSSQIALLSRGKFVCSKKAVLQAGDLNYPSFAVLFGRNALNASVTYRRVVTNVGKPQSAYAVKVEQPNGVSVTVEPRKLKFEKVGQKLSYKVTFLAIGGARVAGIMVFRIVFLFLAFMVTNSIAVADQQTYIVHMDKTKLEASIHSQDSSKPWSESIIDFISEDSMQKEEEEEEEEEEEEEEEILAPQLLCTYEASMFGFAAQLSKKHLKYLNQVDGFLSAIPDELSTLHTTCTPHFLGINNGSALWSASNLATDMIIGVMDSGIWPEHISFEDSDLSPVPSHWKGVCEPGTNFSASNCNKKLIGARTYFKGYEKAFGKLNETVSYLSPRDSEGHGTHTASTAAGNVVKNANLFGQARGTASGMRYTSRIAVYKVCWPKGCVNSDILAALDQAVSDGVDVLSLSLGSDPKPFYEDLIAIASFGATKKRVFVACSAGNEGPSPSTVSKCCSMDHDSTKEEAQYCSEGSLDSKLVQGKIVVCERGINGRNEKGEVVKVAGRAGMIILNSENQGEEIFAEVHILPATSLGASASKIIRSYVQSDKKPTASISFLGTRFGDPAPVMAAFSSRGPSIVGPDMIKPDVTAPGVNILAAWPPKTSPSYVMNDKREVLFNILWGTSMSCPHVSGVAALLKSLHKDWSPAAIKSALMTTAYTLNNKGAPISDLASDNSAFATPFAFGSGHVNPVSASDPGLVYDISTEDYLNYLCSLNYTSSQIALLSRGKFVCSKKAVLQAGDLNYPSFSVLFGKSALNASVTYRRVVTNVGKPQSAYAVKVEQPNGVSVTVEPRVLNFEKVGQKLSYKVTFVAIGKARVAGTSSFGSLVWVSGRYLVRSPIAVTWI 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00515 999 Pfam Fibronectin type-III domain 185 257 IPR041469 -
Pumo5g00515 999 Pfam Fibronectin type-III domain 895 996 IPR041469 -
Pumo5g00515 999 Pfam Subtilase family 415 819 IPR000209 GO:0006508|GO:0008236
Pumo5g00515 999 Pfam PA domain 621 689 IPR003137 -
Pumo5g00515 999 ProSiteProfiles Serine proteases, subtilase domain profile. 1 138 - -
Pumo5g00515 999 Gene3D - 865 998 - -
Pumo5g00515 999 Gene3D - 155 274 - -
Pumo5g00515 999 PRINTS Subtilisin serine protease family (S8) signature 491 504 IPR015500 -
Pumo5g00515 999 PRINTS Subtilisin serine protease family (S8) signature 775 791 IPR015500 -
Pumo5g00515 999 PRINTS Subtilisin serine protease family (S8) signature 413 432 IPR015500 -
Pumo5g00515 999 ProSitePatterns Serine proteases, subtilase family, serine active site. 776 786 IPR023828 -
Pumo5g00515 999 Gene3D Peptidase S8/S53 domain 2 154 IPR036852 GO:0004252|GO:0006508
Pumo5g00515 999 Gene3D Peptidase S8/S53 domain 391 631 IPR036852 GO:0004252|GO:0006508
Pumo5g00515 999 Gene3D Peptidase S8/S53 domain 634 864 IPR036852 GO:0004252|GO:0006508
Pumo5g00515 999 FunFam Subtilisin-like protease SBT1.5 415 610 - -
Pumo5g00515 999 ProSitePatterns Serine proteases, subtilase family, serine active site. 66 76 IPR023828 -
Pumo5g00515 999 ProSiteProfiles Serine proteases, subtilase domain profile. 394 848 - -
Pumo5g00515 999 SUPERFAMILY Subtilisin-like 398 848 IPR036852 GO:0004252|GO:0006508
Pumo5g00515 999 CDD PA_subtilisin_like 614 708 - -
Pumo5g00515 999 CDD Peptidases_S8_3 388 812 IPR034197 -
Pumo5g00515 999 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 614 996 IPR045051 -
Pumo5g00515 999 FunFam Subtilisin-like protease SBT1.5 865 999 - -
Pumo5g00515 999 Coils Coil 318 346 - -
Pumo5g00515 999 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 278 390 IPR037045 -
Pumo5g00515 999 Pfam Subtilase family 11 107 IPR000209 GO:0006508|GO:0008236
Pumo5g00515 999 SUPERFAMILY Subtilisin-like 9 138 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00515 Pumo-Chr5 10707734 10712659 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00515 335 998 Subtilisin-like Serine Gene Family AT1G01900 50.845 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00515 - - gmx:100801830 1254.58