Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00514 ATGATCTTTAGGACACATATCCTATTTCTGGCTTTTATGGTCACAAATTCAATAGCTTTCGCGGACCAACAGACATACATAGTACACATGGACCAGACCAAGATCAAAGCCTCAATTCATTCTCAAGACAGCACAAACCCATGGTTTGAATCAATCATTGATTTCATTTCTGAATCTTCAATGCAAGAAGAAGATGAAGAAGACGACATTTTAGCCCCTCAACTCCTTTACACCTATGAAACCAGCATGTTTGGTTTTGCTGCCCATCTTTCCAAGAAACACCTCAAATACTTGAACCAAGTTGATGGTTTCCTCTCAGCCATACCTGATGAACTATCAACCCTCCACACAACATACACCCCACACTTTCTTGGCCTAAGGAATGGAAGAGCACTTTGGACTGCTTCTAACTTGGCCACTGATGTGATTATTGGGGTTCTTGATTCAGGAATATGGCCTGAACACATCAGTTTCCAAGACTCAGGCATGTCCCCAGTACCTTCTCATTGGAAAGGTGTTTGTGAAAAAGGCACCAAGTTCTCTTCCACTAATTGCAACAAGAAGCTTATTGGTGCAAGATTCTATTACAAGGGGTATGAAAAATTTTTTGGAAAAAAAATCAATGAAACAGTGGATTATCTTTCTCCAAGAGATTCTGAAGGGCATGGAACACACACTGCCTCAACTGCAGCTGGTAATGTGGTGAAGAATGCCAACCTTTTTGGCCAGGCTAGAGGCACAGCAAGTGGAATGAGGTATACCTCTAGAATTGCAGTTTACAAAGTATGCTGGTCTTCTGGTTGTACTAATGCTGACGTATTAGCAGCCATGGACCAAGCAGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGGAGTATTCCCAAACCTTTTTATATTGATAGCATTGCCATAGCTTCATTTGGGGCAACCAAGAAAGGGGTTTTGGTTTCTTGCTCCGCAGGCAATTCAGGCCCCTTTCCATCAACAGTTGGAAATGGTGCTCCATGGATCATGACAGTTGCTGCTAGCTCCACTGACCGAAGCTTTCCAACAAAAGTAAAGCTTGGGAATGGAAAAACCTTCAAAGGGTCATCTTTATACCAAGGTAAGAAGACAAACCAATTGCCCCTTGTCTATGGCAAATCAGCAGGTGCAAAAAAGGAAGCACAGTATTGCATTGAAGGCTCCCTTGATCCAAAGCTTGTGCATGGGAAAATAGTTGCTTGTGAAAGAGGAATAAATGGTAGAACTGAGAAGGGAGAGGAAGTGAAAGTGGCATGGTGGGGCAGGAATGATACTACTCAACAATGA 1317 0.426 MIFRTHILFLAFMVTNSIAFADQQTYIVHMDQTKIKASIHSQDSTNPWFESIIDFISESSMQEEDEEDDILAPQLLYTYETSMFGFAAHLSKKHLKYLNQVDGFLSAIPDELSTLHTTYTPHFLGLRNGRALWTASNLATDVIIGVLDSGIWPEHISFQDSGMSPVPSHWKGVCEKGTKFSSTNCNKKLIGARFYYKGYEKFFGKKINETVDYLSPRDSEGHGTHTASTAAGNVVKNANLFGQARGTASGMRYTSRIAVYKVCWSSGCTNADVLAAMDQAVSDGVDVLSLSLGSIPKPFYIDSIAIASFGATKKGVLVSCSAGNSGPFPSTVGNGAPWIMTVAASSTDRSFPTKVKLGNGKTFKGSSLYQGKKTNQLPLVYGKSAGAKKEAQYCIEGSLDPKLVHGKIVACERGINGRTEKGEEVKVAWWGRNDTTQQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00514 438 CDD Peptidases_S8_3 114 346 IPR034197 -
Pumo5g00514 438 ProSiteProfiles Serine proteases, subtilase domain profile. 118 438 - -
Pumo5g00514 438 Pfam Peptidase inhibitor I9 25 113 IPR010259 -
Pumo5g00514 438 SUPERFAMILY Subtilisin-like 115 380 IPR036852 GO:0004252|GO:0006508
Pumo5g00514 438 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Pumo5g00514 438 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Pumo5g00514 438 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 427 IPR045051 -
Pumo5g00514 438 CDD PA_subtilisin_like 355 428 - -
Pumo5g00514 438 Pfam Subtilase family 141 359 IPR000209 GO:0006508|GO:0008236
Pumo5g00514 438 Gene3D - 348 423 - -
Pumo5g00514 438 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 116 IPR037045 -
Pumo5g00514 438 Gene3D Peptidase S8/S53 domain 141 347 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00514 Pumo-Chr5 10706290 10707606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00514 23 426 Subtilisin-like Serine Gene Family AT1G01900 55.198 1.09e-157 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00514 - - gmx:100790006 800.431