Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00504 ATGCTTGGGCGAAAGCCAAACTACATGGTCATGGCAATTGATCTATCAAAGATCTCTGTCCGGCCATTCAAGCTAAGTGATGTTGATGATGTATTGTTATGGTTGGGAGATGCTAGAGTGACTCAGTACACACGATTAGAGACGTGTGGCTCCAGGTCAGAGGCTTTGACATTCCTCAAACATGAGTGTGTTTACCCCTTACGCCGGTCAATATGCCTTGATGATCGTTCCATAGGGATTGTTTGGGTTGCACCTTATGCCGGTGATGAAAGGTACAAAGCTGACTTGGGTTACGCCTTAGGGGTCAACTATTGGGGCAATGGGATAGCCACCGAGGCACTGAAGATTGTTTTGTCCCAAGTCTTCCACGACTTCCCTCACTTGAGAAGGTTGCAAGCTTTTACTTATTTGGACAACAAGGCTTCACAAAGGGTGTTGGAGAAGGTTGGGTTCCATAGGGAGGGAATAGTGAGAGATTTATATTTCAAGGGGAAGATTGATGATTTCTATATTTTTAGATTTTTGTCAACAGATGAAATTCCTTCTGCAATTGTTGTTTAA 561 0.4367 MLGRKPNYMVMAIDLSKISVRPFKLSDVDDVLLWLGDARVTQYTRLETCGSRSEALTFLKHECVYPLRRSICLDDRSIGIVWVAPYAGDERYKADLGYALGVNYWGNGIATEALKIVLSQVFHDFPHLRRLQAFTYLDNKASQRVLEKVGFHREGIVRDLYFKGKIDDFYIFRFLSTDEIPSAIVV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00504 186 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 16 179 - -
Pumo5g00504 186 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 18 176 IPR000182 GO:0016747
Pumo5g00504 186 Pfam Acetyltransferase (GNAT) domain 19 152 IPR000182 GO:0016747
Pumo5g00504 186 Gene3D - 12 181 - -
Pumo5g00504 186 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 11 172 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00504 Pumo-Chr5 10536029 10536788 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo5g00504 Acetyltransf_3 2.4e-21 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00504 - - gmx:100802886 334.339