Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00503 ATGAGCGGAAGCAGAACTACGTGGTTATGGCAATTGATCTGTCAAGGATCTGTGCGTGCATTCAAGCTAAGTGACGTTGACGATGTATTGTTATGGTTGGGAGATGATAGAGTGACTCATAACACACGATTGAAGACTTGTGGGTCAAGGTATAAAGCAGACTTAGGGTATGCCCTGGGGTTCAACTATTGGGGCAATGGGATAGCCACTAAGGCACTCGAGATTGTTTTGTCCCAAGTGTTCCACGACTTCCCCTATTTGCGAAGGCTGCAAGCTGTTACTCTTGTAGACAACAAGGCTTCCCAAAGGGTATTGGAGAAGGTTGGGTTCCTTAGGGAGGGGATGCTGAGAAAGTTCTATTATGTTAATGGGAAATTAGAAGACTTCCATATTTTTAGTTTTTTGTCAACAGATGAAATTCCTTCTGCAGTTTAA 435 0.4345 MSGSRTTWLWQLICQGSVRAFKLSDVDDVLLWLGDDRVTHNTRLKTCGSRYKADLGYALGFNYWGNGIATKALEIVLSQVFHDFPYLRRLQAVTLVDNKASQRVLEKVGFLREGMLRKFYYVNGKLEDFHIFSFLSTDEIPSAV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00503 144 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 51 135 IPR016181 -
Pumo5g00503 144 Gene3D - 39 135 - -
Pumo5g00503 144 Pfam Acetyltransferase (GNAT) domain 52 110 IPR000182 GO:0016747
Pumo5g00503 144 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 128 IPR000182 GO:0016747
Pumo5g00503 144 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 17 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00503 Pumo-Chr5 10534209 10534731 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo5g00503 Acetyltransf_3 5.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00503 - - gmx:100802886 174.481