Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00490 ATGGTTCACGAAGAGTTTGAGGAAATGAACAAGGATCTCTTTGAAAAGTGTATGGAGATAGTAGATAAGTGTCTTAGTGATGCTAAGATGGACAAGAGCAAGGTGCATGATGTTGTCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCAGGACTTCTTCAATGGGAAGGAACTGTGCAAGAGCATCAACCCTGACGAGGCTGTTGCTTACGGTGCAGCTGTGCAGGCTGCTTTGTTATGTGAAGGCATTAAGAATGGTCCAAAGTTGTTTCAGTATGTTGCACCACTATAA 306 0.4379 MVHEEFEEMNKDLFEKCMEIVDKCLSDAKMDKSKVHDVVLVGGSSRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAALLCEGIKNGPKLFQYVAPL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00490 101 ProSitePatterns Heat shock hsp70 proteins family signature 3. 38 52 IPR018181 -
Pumo5g00490 101 FunFam Heat shock cognate 70 kDa protein 2 17 64 - -
Pumo5g00490 101 SUPERFAMILY Actin-like ATPase domain 4 84 IPR043129 -
Pumo5g00490 101 Gene3D - 17 64 - -
Pumo5g00490 101 PANTHER HEAT SHOCK PROTEIN 70KDA 4 86 IPR013126 GO:0005524|GO:0140662
Pumo5g00490 101 Gene3D - 65 82 - -
Pumo5g00490 101 PRINTS 70kDa heat shock protein signature 67 87 - -
Pumo5g00490 101 PRINTS 70kDa heat shock protein signature 35 51 - -
Pumo5g00490 101 Pfam Hsp70 protein 3 100 IPR013126 GO:0005524|GO:0140662
Pumo5g00490 101 Gene3D Actin; Chain A, domain 4 3 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00490 Pumo-Chr5 10157681 10158094 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00490 6 84 Calmodulin-binding Proteins AT3G12580 88.608 3.28e-43 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00490 K03283 - gmx:102667572 145.206