Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00489 ATGAACTGTACTGGAACTCAATCGGTTTCAAATGGGGTTTGGGGGAATGGACGATCAGAAAATTGCCATAGGAATCGACCTTGGTACAACGCATTCTGTGTTGCAGTGTGGAATGAGCAACATGGGAAAAGTGAAATAATCCACAACGACCAAGGCCACTACACCACTCCTTCTTTTGTTGCTATCAGGGATGATGTAACGTTGATTGATGTCAAGAGGTTGATTGGGAGGAAGTATAGTGATCCCATTGTTCAAGATGATAAAAAGTTGTGGCCATTCAAGGTGGTGGCCGGGGTTGATGACAAAATAACGATCCTAGTTAAGTACAAGGGTCAGGAGCAGCACTTTTCTCCTGAGGAAATATCTTCTATGGTTCTCAGCAAGATGCGGGAGTTTGCAGAAATATATATGGAAATATCTGCGAAGGATACTGTGAAGATTAATGCTGTTGTTACTGTGCCTGCATGTTTCAATGACTCCCAGCGAAAAGCCACCATAGATGCCGCAACTAATGCTGGCCTAAATGTTATGCGGATAACCAACGAACCTACCGCTGCAGCCATTGCATATGCCTTTAAAGAAAGGACCAGTTGGGTTGGAGAGCGAAACATTTTTGTATTTGATCTTGGTGGTGGTACTTTTGACGTGTCTCTTGTCACACTTAGGGATATGACCTTCCAAGTTAAGGCTATTGGTGTAGACACTCACCTTTGA 714 0.4356 MNCTGTQSVSNGVWGNGRSENCHRNRPWYNAFCVAVWNEQHGKSEIIHNDQGHYTTPSFVAIRDDVTLIDVKRLIGRKYSDPIVQDDKKLWPFKVVAGVDDKITILVKYKGQEQHFSPEEISSMVLSKMREFAEIYMEISAKDTVKINAVVTVPACFNDSQRKATIDAATNAGLNVMRITNEPTAAAIAYAFKERTSWVGERNIFVFDLGGGTFDVSLVTLRDMTFQVKAIGVDTHL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00489 237 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Pumo5g00489 237 Gene3D - 200 237 - -
Pumo5g00489 237 PRINTS 70kDa heat shock protein signature 212 222 - -
Pumo5g00489 237 PRINTS 70kDa heat shock protein signature 51 63 - -
Pumo5g00489 237 PRINTS 70kDa heat shock protein signature 149 169 - -
Pumo5g00489 237 FunFam heat shock 70 kDa protein-like 69 124 - -
Pumo5g00489 237 PANTHER HEAT SHOCK PROTEIN 70KDA 33 237 IPR013126 GO:0005524|GO:0140662
Pumo5g00489 237 Gene3D - 30 199 - -
Pumo5g00489 237 SUPERFAMILY Actin-like ATPase domain 201 237 IPR043129 -
Pumo5g00489 237 Pfam Hsp70 protein 32 237 IPR013126 GO:0005524|GO:0140662
Pumo5g00489 237 SUPERFAMILY Actin-like ATPase domain 33 192 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00489 Pumo-Chr5 10149858 10151477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00489 33 237 Calmodulin-binding Proteins AT5G02500 57.658 8.05e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00489 K03283 - gmx:102667572 261.922