Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00482 ATGGCATTACAGAACATTGGTGCCAGTAACAGCGATGATGCCTTCTACAGGTATAAGATGCCTAGAATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACAAATATTGTCAATATGGTTGATATTGCAAAAGCCTTGGCAAGGCCAGCTTCTTACACAACAAAGTATTTTGGCTGTGAGCTTGGAGCCCAATCAAAATTTGATGAGAAAACTGGGACTTCTCATGTTAACGGGGCACATGATACTGCAAAACTTGCTGGCCTTCTCGAGATCTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCTTAATTACTAAGAACCAGATGATCCAGCTGAAATGTGCTGCTTGTGGGTTCGTGTCTGATGTTGATATGAGAGACAAGCTAACTACCTTCATTATTAAGAACCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTGAATTGGCTGATGAGGAACAGAAAAAGCTGAAGAAAGAGGTTATTAAGAAGAAAGGAACTTCATCTTCTAAGGATGGGACCACAAAATCTACCTCTTCAAGGAAAAAGGCAAATGGCTCTGACGAAGACCGTGCATCTCCCCCTCACAGTCAAATTGATGAGAAGGATCAGGCTCATGTCGAGGAAGATGATGATGATGACGTACAATGGCAAACAGATACATCATTGGAGGCTGCTCGTCTACGAATCCAGGAACAGTTGAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAGATGAACCAGAGAAGGAGAGAGCAGCAACTAAGGTAAGTGACAACTCTGAGAATGGTAACTCCATGACCTACAGGACACTGGTTGCAGAAGTCAGAGCAAATTTGAATAAAGGTGTTAAGGCGAAGGAGTTACTGTCCCATCTGGCAGCACTTCCTGCATCAGCTCAGGAAAAGATGAGTGCTTTGTATGAAGCCATATTTGAGGGCATCGAGAAAGGGTTTGCAAAAGAAGCAATTAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCCGAGGAAGAGGGTTTGCAGTTGTTACTGCTGCGTGCAATTGAGGAATTTTCTTGTAAGTCCACTTCCAATGCGTTGAAGGAGGTTGCCCTGGTTCTGAAGGCACTCTACGATGCTGATGTGTTGGACGAAGAGCACATAGTGCAGTGGTATCAGAAGGGACTGAAGGGCGATAACAAGAAATCTCAGATTTGGAAGAATGCCCAACTTTTCATTGAATGGCTTCAGAATGCAGAATCAGAATCCGAGGAAGAATAA 1332 0.4362 MALQNIGASNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGELADEEQKKLKKEVIKKKGTSSSKDGTTKSTSSRKKANGSDEDRASPPHSQIDEKDQAHVEEDDDDDVQWQTDTSLEAARLRIQEQLSAVTADMVMLSTDEPEKERAATKVSDNSENGNSMTYRTLVAEVRANLNKGVKAKELLSHLAALPASAQEKMSALYEAIFEGIEKGFAKEAIKKKSYLAAAVAEEEGLQLLLLRAIEEFSCKSTSNALKEVALVLKALYDADVLDEEHIVQWYQKGLKGDNKKSQIWKNAQLFIEWLQNAESESEEE 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00482 443 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Pumo5g00482 443 Gene3D - 105 145 - -
Pumo5g00482 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 442 IPR045196 GO:0003743|GO:0006413
Pumo5g00482 443 MobiDBLite consensus disorder prediction 148 227 - -
Pumo5g00482 443 Pfam eIF4-gamma/eIF5/eIF2-epsilon 365 443 IPR003307 GO:0005515
Pumo5g00482 443 CDD W2_eIF5 296 441 - -
Pumo5g00482 443 Gene3D - 283 443 - -
Pumo5g00482 443 SUPERFAMILY ARM repeat 293 437 IPR016024 -
Pumo5g00482 443 ProSiteProfiles W2 domain profile. 283 443 IPR003307 GO:0005515
Pumo5g00482 443 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Pumo5g00482 443 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Pumo5g00482 443 MobiDBLite consensus disorder prediction 147 239 - -
Pumo5g00482 443 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Pumo5g00482 443 Gene3D - 2 104 - -
Pumo5g00482 443 SMART 542_3 351 439 IPR003307 GO:0005515
Pumo5g00482 443 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Pumo5g00482 443 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00482 Pumo-Chr5 10072171 10075843 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00482 1 436 Eukaryotic Initiation Factors Gene Family AT1G36730 65.695 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00482 K03262 - gmx:100796346 696.427