Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00454 ATGGCTTCCCTGCTTATTCACCTCCCTCCTATCCCTATTCTTCAACACTTAATCCTCCTCCTGTTCATACTGATTCAGATACCTCCATATTTAAGCTCCTACGATGATTATAGGGGTTGTACTAATCTGATAAGTTGTGGGAATATAAGAAACATCAGTTTTCCATTCTGGGGAGAAAACCGCCCAAGAGAGTGTGGCCACCCTCTGATGCAACTCAGCTGCCAAAATGACATCACCGCTTACATAACCATTAAGGGTGTCAAGTACATGGTTTTGGAGGCCAACCCAGATGAACATACTTTGAGAATCACCAGAGTGGACTACTTGCCAGGCTTATGCCAACCAAAACTTGTCAACACCAGCCTTGACACTCAGCTCTTTGTTTTTGGGTCAGACTATAAGAATCTTACCCTTTTCTATGGTTGTGCTGCTTCAAATTATTGGCCTCCCACCAATAAATTTCATTGTAATGAGGCAGCTTCTGGTGATTATTATGTTTATCCTCAGTTTGGGTCTACGTCTATCCCTGGTATGTTTTGCAACGCAAGTGTGGTTGTTCCAGTTCCTCCGTCATTGATTGATGATGATATTAATGATGTCAACAAAATACGCGAGGCAGTCAAAGACGGATTTGTGGTGAGATGGATAGTAGGTCTTAAAGAATGTGAGAATTGTACTATATTGGGTGGAGTATGCGGTATCGACTGGTATTCATATCAAACAACCTGTTACTGCAGAGATGGACCTTGTTCTAATTTCTTACCAGATGACAAAGCACGTCCACAGTCCCCACCTCCAGGTAAAAACAAGAAAGGTGTTGCAATAGGTGCTGGTGTAGGAGGAGTTGTAGTCCTTCTTCTCATTCTTGGATGTGTGTACTTTGTGTTGCAAAGAAGGAGAAAAATTGCTTATAATAAATCAAGAAGCATGGACCTCTTCATGGCTCCTTCAAGCGGAGACACTTTTGCATCTACAACTAATACGTCTCAAAGTCTATCTTCTTACCAATCTTCCAACACTGACCCAGTGCCGCCGAGGAGTTACTACTTTGGTGTCCAGGTCTTTACCTATGAGGAACTAGAGGAAGCTACCAAAAACTTTGACCCTTCTAGAGAACTTGGTGAGGGAGGTTTTGGCACTGTCTACAAAGGTGAACTCAAAGATGGACGTATAGTTGCAGTGAAACGCCATTATGAAAGCAACTCTAGGCGTATTGAGCAGTTCATGAATGAAGTTCAGATTCTAGCCCGCTTAAGGCACAAGAGCCTGGTGACACTCTTTGGATGCACCTCTAGACATAGCAGAGAACTTCTCCTTGTTTATGAATTCATACCTAATGGAACAGTGGCTGATCATCTTCAAGGAAGAAGCTCAAAATCAACTTTACTCCCTTGGCCTATAAGATTGAACATTGCAGTTGAAACAGCTGAGGCTCTAGCCTACCTACATGCAAATGATGTCATACATCGTGATGTTAAAACCAACAACATTCTCCTGGATGATAACTTTCGCGTCAAGGTTGCTGATTTTGGTCTCTCAAGGGATTTCCCAAACCATGTCACTCATGTGTCAACAGCTCCACAGGGAACACCTGGCTATGTTGACCCTGAGTATTATCAGTGCTACCAACTCACTGATAAAAGTGATGTTTATAGCTTTGGGGTGGTCTTAGTTGAGCTCATATCAACATTGCAAGCTGTGGACATCAACAGGAATCGCAGTGAAGTGAACTTGGCAAACATGGCTATCAATAAAATTCAGAACCAGGAACTGCATGAGTTGGTTGATCCTTACCTTGGGTTTGAGAGGGATTATGCTATAAGGAGGATGACAACAGCAGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAGGAAAGAGAGATGAGACCCTCCATGAATGAGGTGGTGGAGATCTTGAGAGGAATCAAGAGTGAAGGGCTTGGTGCACGGGAAGAGGCAGAGGTATTGGAAATTAGAACAGATGAAGCTAGACTTTTGAAGAAGGTTCCTTCCCCGTTTTCACCAGATTCAGTTGTTGATAAATGGGTTAGCGGCTCCTCTGTATCTAATTCCTCATAG 2079 0.4315 MASLLIHLPPIPILQHLILLLFILIQIPPYLSSYDDYRGCTNLISCGNIRNISFPFWGENRPRECGHPLMQLSCQNDITAYITIKGVKYMVLEANPDEHTLRITRVDYLPGLCQPKLVNTSLDTQLFVFGSDYKNLTLFYGCAASNYWPPTNKFHCNEAASGDYYVYPQFGSTSIPGMFCNASVVVPVPPSLIDDDINDVNKIREAVKDGFVVRWIVGLKECENCTILGGVCGIDWYSYQTTCYCRDGPCSNFLPDDKARPQSPPPGKNKKGVAIGAGVGGVVVLLLILGCVYFVLQRRRKIAYNKSRSMDLFMAPSSGDTFASTTNTSQSLSSYQSSNTDPVPPRSYYFGVQVFTYEELEEATKNFDPSRELGEGGFGTVYKGELKDGRIVAVKRHYESNSRRIEQFMNEVQILARLRHKSLVTLFGCTSRHSRELLLVYEFIPNGTVADHLQGRSSKSTLLPWPIRLNIAVETAEALAYLHANDVIHRDVKTNNILLDDNFRVKVADFGLSRDFPNHVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISTLQAVDINRNRSEVNLANMAINKIQNQELHELVDPYLGFERDYAIRRMTTAVAELAFRCLQQEREMRPSMNEVVEILRGIKSEGLGAREEAEVLEIRTDEARLLKKVPSPFSPDSVVDKWVSGSSVSNSS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00454 692 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 347 443 - -
Pumo5g00454 692 ProSiteProfiles Protein kinase domain profile. 367 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00454 692 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 25 687 IPR044652 GO:0004672
Pumo5g00454 692 Gene3D Transferase(Phosphotransferase) domain 1 444 650 - -
Pumo5g00454 692 Pfam Wall-associated receptor kinase C-terminal 179 248 IPR032872 -
Pumo5g00454 692 MobiDBLite consensus disorder prediction 671 692 - -
Pumo5g00454 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Pumo5g00454 692 Pfam Protein kinase domain 370 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00454 692 Gene3D Phosphorylase Kinase; domain 1 343 443 - -
Pumo5g00454 692 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Pumo5g00454 692 FunFam Wall-associated receptor kinase-like 20 444 652 - -
Pumo5g00454 692 SUPERFAMILY Protein kinase-like (PK-like) 346 641 IPR011009 -
Pumo5g00454 692 SMART serkin_6 367 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00454 692 Pfam Wall-associated receptor kinase galacturonan-binding 40 104 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00454 Pumo-Chr5 9747676 9759339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00454 39 692 Receptor kinase-like Gene Family AT1G25390 42.750 1.33e-153 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pumo5g00454 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00454 - - gmx:100811407 853.588