Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00438 ATGCCAATGCCCCATGACGGTCCTGCTAAATGGAATTCATCTTGCCAACCATCAAGGACTCCAGAGGATGATGCATCTTCTTTTGCCTTAAAACACAAAACTCAAACACAAGAACAGATGTTAGGCAGTGAAAGATATTCATCTGGATCTACAATGAGTGGTATGCAAGTAAAAAGGGTATCATCATCTACCGGCACTATGAATGGGACAAAAGACTTTGTTGCTATGAATAGAAGTGTAAGTGGTCGAACAAGGATGAGGTCACCTGCCAAAGCGGATAGTTCCAAATTTGACCTAGAGAAAAAACCTTGTAATCGACAGCATAGTTCCTTGTCTCACGTAAGGACATTAGAGAGAAAAAGAAGGATTCCTAATGTCACACAACTAGAAGGCACGGGTTCTGTTTATTCAGTTGGTGCAAAACAAAGAAATCTCCATTCTGGTGGACTGGGTGGCAAAAGAAGGGACTTCAATGCTTCCTCCTTGAACAATTCTACTATAAAAAATAAACAAGTTGGTCAAGGAGAAAGAGTTATTAAGGTTAATGACAATAAGATCAATGATGTAGTGTCATTTACATTTAACTCCCCCTTGAAGCAAAAGATAGGAATACCTGGCGAGAGGGAAGACACAAGCAGCGACAATGAGAGTATGACGTATTTGCAAAGGCCTTCGCCCTTGAGAGTTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAGGAATTAACCTCTCAAAGAGATGAGGAGTTGGCTACAGGTGCTCCACCTAAAAAATCAAGTGCCATGATTCTTCAAGAGCTGATATCTGCTCTAAGTTCCGAGCATCTGATCTGTCATGATGGTCATCATATGTTTAATGAAAATGTTGGTTTTTGTTATGGGGCAAAACAAGAAAGGTTTTTAGGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGATCTGTTTTGGAAGCTTCCTTTTCTTCCAGCAGTCTAGACGAAAGCTCAGGGCATGGATTTCACCCTGACTCCATGAATTACTCTTATTATGGTCAACCGGAACATGAGACTGAACTTTCAGATTCTGCATCATCCTTCAACAAAGGAAGGATAGGTGAGATACTGAGTGACCTTGTCAACCAAATTCCCAGGGCATTAGAAAGTTTGCACACTTTTGGGACAGAATTGACAAGAAGCAAGCTCAACCATATGAAGGATGTTCTCTTGCATGCTGAGTTGGTGCTTGGAATTGCAACTGCCCGCAGAGAGGATGAAGGGCCACAACTTCTAATATACCGGTTCCTCGTTGATGATCTCGACGGTATGGCGAGTGATGTTATGTGGACAGATGCTAATGGCGTTGTGGCTTGTGAGGATTCTAAACAGAGAAAGGAGCTAAAGGGGTTTCTCCTTGATTGTGTTATAGAATATCTAGAATCAAATTGCTGCCAATATTTTAACTCTGGATTCAAGGCATGGACAAAGCTGCCCTTATGCATGAAAGCTGAGATGTTGGCTCAAGAGGTGAAGAGGGAGATCAACAAGTGGTTATCTATGGTTGGGATGGTGCCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGAAAATGGACTGACTTTGATATTGAAGCATTTGAGGCTGGTGTTGACATAGATGGGGATATACTTCAAATTTTGGTTGATGAAGTTGTTGAAGACCTTGCAGGTTGCAAGCAGGGCACAATTTCCTTCTAA 1722 0.4164 MPMPHDGPAKWNSSCQPSRTPEDDASSFALKHKTQTQEQMLGSERYSSGSTMSGMQVKRVSSSTGTMNGTKDFVAMNRSVSGRTRMRSPAKADSSKFDLEKKPCNRQHSSLSHVRTLERKRRIPNVTQLEGTGSVYSVGAKQRNLHSGGLGGKRRDFNASSLNNSTIKNKQVGQGERVIKVNDNKINDVVSFTFNSPLKQKIGIPGEREDTSSDNESMTYLQRPSPLRVDALGAFLEQKLKELTSQRDEELATGAPPKKSSAMILQELISALSSEHLICHDGHHMFNENVGFCYGAKQERFLGTSCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSMNYSYYGQPEHETELSDSASSFNKGRIGEILSDLVNQIPRALESLHTFGTELTRSKLNHMKDVLLHAELVLGIATARREDEGPQLLIYRFLVDDLDGMASDVMWTDANGVVACEDSKQRKELKGFLLDCVIEYLESNCCQYFNSGFKAWTKLPLCMKAEMLAQEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWTDFDIEAFEAGVDIDGDILQILVDEVVEDLAGCKQGTISF 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00438 573 MobiDBLite consensus disorder prediction 146 173 - -
Pumo5g00438 573 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 16 562 - -
Pumo5g00438 573 MobiDBLite consensus disorder prediction 30 54 - -
Pumo5g00438 573 Pfam Domain of unknown function (DUF4378) 396 558 IPR025486 -
Pumo5g00438 573 MobiDBLite consensus disorder prediction 1 54 - -
Pumo5g00438 573 MobiDBLite consensus disorder prediction 157 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00438 Pumo-Chr5 9605481 9608526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00438 22 563 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 26.889 1.34e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00438 - - gmx:100813026 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00438 5 9605481 9608526 Pumo5g00438 5 9605481 9608526 ECH