Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00437 ATGAATGATTCCACGGTGAAGAATTTGGCCATCACAGAGAAGAAGGTGCAGCATAAGCCTGGTGGTTGTGTTGGCATTTTCTTTCAGCTCATTGATTGGAAGAGGAAGCTCTCCAAGAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCTGCTCGTGCAAAAAAGTTTAAGGGGGATGAAAAAATGCCAAATTCCAAGATTCACTTGATTGCTAATGAGAATAGTGGGGGTTTCCCAAGTGCCAAAAAGGGTGGGAATCATGTAGATGTAGAGCAAAAGAGTGAAATGCGAGTTCCGAGTCTGGTAGCTAGGTTGATGGGTCTAGAATCAATACCGGGTGCACAGCGAGATAAGTCCAAGAAAGCCTTGTGTGCTGACGTTTGTGCTGATGGGAAGAAAGAGTCTTTGGGTGACCATTGTGAGTTGGATAGGCAAGGCATGGATTTGGAAAAGGGAGTTGTAAAGCATGATTCAAGACCTCAGAAGCTTCAGAAAACTGGGGCGTATGAGAGAAGGGCAGTGACTAGGTTTGGAGCTGAGGCACTGCAAATTAAGAGTGTTTTGTCACGAGCAAGAAAGTATAATCACCATCATCACCATCCGAAGCTTGCTTCTTCTTTGAAAAGCCCAAGAATTCCTTCCGGAAAGAGTGCTTCTCGAAGCTCTAGGTTAATAGGAGCAGCTACTAAAATATTGGAACCTGGACTGCAAAGCAGAAGTAGAGCTAAAAACTCTCTTACATATCCTGCTTCCATGTATCCTCCTAAGACTGGCATTGTGACAAATTGTGTGGAAGATGGGTCAGCGATTATGCAAAATCAGTCTTGTTATGACGCCAGCTCATGCAAGCAATTGATGGGGCAGACCTCTTGCAAAAACTGTGGTAATTTGCTAGATGTTGTTGACTGCAAGCTTGAGGTTGGGGGACAGCCATCGGTTCCCCCACCCATTGTTTCAGATGTTATCACAGCTACCTCTATGGTATCATCAGAGAAGAAGGGAAAGTCATTCACTCCTTCTCATGACATGAAAGAGATGTAG 1041 0.4457 MNDSTVKNLAITEKKVQHKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMPNSKIHLIANENSGGFPSAKKGGNHVDVEQKSEMRVPSLVARLMGLESIPGAQRDKSKKALCADVCADGKKESLGDHCELDRQGMDLEKGVVKHDSRPQKLQKTGAYERRAVTRFGAEALQIKSVLSRARKYNHHHHHPKLASSLKSPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKNSLTYPASMYPPKTGIVTNCVEDGSAIMQNQSCYDASSCKQLMGQTSCKNCGNLLDVVDCKLEVGGQPSVPPPIVSDVITATSMVSSEKKGKSFTPSHDMKEM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00437 346 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 341 - -
Pumo5g00437 346 MobiDBLite consensus disorder prediction 192 224 - -
Pumo5g00437 346 MobiDBLite consensus disorder prediction 210 224 - -
Pumo5g00437 346 Pfam DUF761-associated sequence motif 91 116 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00437 Pumo-Chr5 9604071 9605382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00437 1 300 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 44.805 9.77e-59 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00437 - - gmx:100813026 585.104