Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00423 ATGGCTATGGTCCTCACACCTCTTTTGGCCATACTTGCTATTCTCCTACTTAAACTCGTCTATGACAACCTCTCATGTTACTGGCTCACCCCACTACGCATAAAAAAGATCATGGATATGCAAGGTGTCCGTGGCCCTAAACCTCGTTTCTTCACAGGCAACATCTTAGACATGGCTTCCCTTATCTCCAAAGCAACCTCCCAAGACATGAAAACCATAAGCCATGACATTGTTGGCCGTCTTCTACCACATTTCCTAGTTTGGTCTAGCCAATTTGGAAAGAGGTTTCTGTATTGGAATGGTTCAGAACCAAGGTTGTGTCTCACTGAGACTGAGTTGATCAAAGAGTTCCTTTCAAAATACAGTACGGTATCTGGGAAATCCTGGCAACAAAGACAAGGTTCTAAGAATTTCATTGGGGAGGGACTGTTGATGGCAAATGGTGAAGATTGGTACCACCAACGTCACATCGTTGCCCCTGCATTCATGGGGGACAGACTTAAGAGCTATGCTGGGCACATGGTGGAATGCACTAAGGAGATGCTCCAATCACTGAAAATTGCGTTAGAGAGTGGCCAAACTGAGGTGGAGATTGGTCACTACATGACTAAACTCACTGCGGATATTATCTCTAGGACTGAGTTTGGTACCAGCTACCAGAAGGGCAAGAAAATATTCCACCTCCTCACACTCCTGCAGACTCGTTGTGCTCAAGCAAGTCGTCATCTTTGCATTCCTGGAAGCAGGTTTTTTCCAAGCAAGTATAACAGAGAGATAAAGTCTTTGAAGATGGAAGTGGAGACTCTGTTGATGGAGATCATACAAAGCAGGAAGGACTGTGTGGAGATTGGTAGGAGCAATTCTTATGGGAATGATTTGTTGGGGATGCTCCTGAATGAGATGCAGAAGAAAAAAGGGAATGGAAACAGCATCAATCTGCAGCTAGTGATGGATCAATGCAAAACATTTTTCTTTGCAGGACATGAAACCACTGCCCTTTTACTCACTTGGACAGTCATGTTACTAGCCAGCAATACATCATGGCAAGACAAAGTCAGAGCTGAGGTTAAAAGTGTCTGCAATGGGGGAATTCCCTCTCTGGATCAACTCTCCAAGCTCACTCTTTTGCATATGGTGATCAACGAATCAATGAGGTTGTATCCCCCAGCATCGGTGCTCCCTAGAATGGTGTTTGAAGACATAGTGCTAGGTGACCTTTATATCCCTAAGGGCTTATCAATTTGGATCCCTGTGCTGGCTATTCACCATAGTGAAAAACTATGGGGTAAAGATGCAAATGAGTTTAACCCAGAGAGGTTCACTTCAAAGTCATTTGTTCCTGGCCGTTTTTTACCATTTGCTTCTGGCCCTAGAAATTGTGTTGGACAAGCATTTGCCTTAATGGAAGCTAAGATTATTCTAGCCATGTTGATTTCTCGGTTTAGCTTCACCATTTCTGAAAATTACCGTCATGCCCCTGTGGTTGTCCTCACAATTAAGCCCAAATATGGAGTTCAAGTTTGTTTGAAGTCCTTGGAGCCATGA 1545 0.4395 MAMVLTPLLAILAILLLKLVYDNLSCYWLTPLRIKKIMDMQGVRGPKPRFFTGNILDMASLISKATSQDMKTISHDIVGRLLPHFLVWSSQFGKRFLYWNGSEPRLCLTETELIKEFLSKYSTVSGKSWQQRQGSKNFIGEGLLMANGEDWYHQRHIVAPAFMGDRLKSYAGHMVECTKEMLQSLKIALESGQTEVEIGHYMTKLTADIISRTEFGTSYQKGKKIFHLLTLLQTRCAQASRHLCIPGSRFFPSKYNREIKSLKMEVETLLMEIIQSRKDCVEIGRSNSYGNDLLGMLLNEMQKKKGNGNSINLQLVMDQCKTFFFAGHETTALLLTWTVMLLASNTSWQDKVRAEVKSVCNGGIPSLDQLSKLTLLHMVINESMRLYPPASVLPRMVFEDIVLGDLYIPKGLSIWIPVLAIHHSEKLWGKDANEFNPERFTSKSFVPGRFLPFASGPRNCVGQAFALMEAKIILAMLISRFSFTISENYRHAPVVVLTIKPKYGVQVCLKSLEP 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00423 514 Gene3D Cytochrome P450 28 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PANTHER CYTOCHROME P450 FAMILY MEMBER 20 504 - -
Pumo5g00423 514 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 SUPERFAMILY Cytochrome P450 45 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00423 514 CDD CYP72_clan 82 506 - -
Pumo5g00423 514 Pfam Cytochrome P450 90 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00423 Pumo-Chr5 9294956 9298577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00423 4 374 Cytochrome P450 AT5G38450 66.220 8.98e-170 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00423 K10717 - gmx:100808392 994.956