Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00408 ATGGCTGCCATTTCACTCAGGCACAACCCTCAAGTAAACAACACTAACCAGCAACGTGAAATCGTCACTGAAGAAATCCAAGGACTCATAAGAGTCCACAGAGATGGACGTGTAGAAAGGCCACCAATTGTGCCTAGTGTCTCCTCCACAATGGCATCAGAACGTGGTGTCACTGCCAAAGATGTTACGATCAACAAAGAGACCAACTTATGGGCACGTGTTTATGTGCCAATAAGTTGTCACACAAAGCTTCTTCCTCTGCTTGTGTACTTCCACGGTGGTGGATTCTGTGTTGGTTCTGCTGCTTGGAGCTGTTACCATGAGTTCTTGACCAACCTTGCTTCCAAAGCAAACTGTGTCATTCTCTCTGTGGACTACCACTTAGCCCCTGAGAACCGTCTTCCAGTGGCATATGATGATGGTTTCAACGCTCTCATGTGGGTGAAAAGAGAAGCACTGAATGGCTCTAGTGTGCAAAAGTGGTGGCTGAGTCATTGCAACATGTCTTCCCTTTTCCTAGCTGGTGATAGTGCAGGTGCCAACATTGCTTACAATGTGGCCACACGCATAGGATCAACATCAAACACACCAATGACACCATCATCTCTCAAGGGTGTTATATTGATCCAACCTTTCTTTGGAGGAGAAGAAAGAACTTGCTCTGAGAAGCATTCCCTTCAGCCACCCAATTCAGCACTCACTTTATCTGTTTCTGACACTTATTGGCGCTTGGCACTTCCTCTTGGGGCTACTCGTGACCACCCTTATTGCAACCCTCTTGCACATGGCACGGTCAAGTTGAGAGATTTGAGGCTTCCATCCACTATGGTGTGTGTTTCAGAAATGGATATACTGAGAGATAGGAACTTGGAGTTCTCAAACGCTTTGACCAAATCAGGGAAAAGGGTTGAAACAGTTGTTTACAAAGGCGTAGGCCATGCATTCCAAGTGCTGCATAATTACCAGCTTTCCCATTCCCGGACCCAAGAAATGATATCTCACATCACGAACTTTCTTAACCAGTAA 1026 0.46 MAAISLRHNPQVNNTNQQREIVTEEIQGLIRVHRDGRVERPPIVPSVSSTMASERGVTAKDVTINKETNLWARVYVPISCHTKLLPLLVYFHGGGFCVGSAAWSCYHEFLTNLASKANCVILSVDYHLAPENRLPVAYDDGFNALMWVKREALNGSSVQKWWLSHCNMSSLFLAGDSAGANIAYNVATRIGSTSNTPMTPSSLKGVILIQPFFGGEERTCSEKHSLQPPNSALTLSVSDTYWRLALPLGATRDHPYCNPLAHGTVKLRDLRLPSTMVCVSEMDILRDRNLEFSNALTKSGKRVETVVYKGVGHAFQVLHNYQLSHSRTQEMISHITNFLNQ 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00408 341 Gene3D alpha/beta hydrolase 6 340 IPR029058 -
Pumo5g00408 341 Pfam alpha/beta hydrolase fold 88 316 IPR013094 GO:0016787
Pumo5g00408 341 SUPERFAMILY alpha/beta-Hydrolases 25 341 IPR029058 -
Pumo5g00408 341 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 171 183 IPR033140 -
Pumo5g00408 341 PANTHER ARYLACETAMIDE DEACETYLASE 25 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00408 Pumo-Chr5 9133556 9134863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00408 1 340 Carbohydrate Esterase AT5G16080 53.009 3.93e-125 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00408 - - gmx:100819429 637.106