Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00375 ATGCTAGAGGGAGGCATAACTCACCAAGATTTTGCTGGGCACAAGGGTACAATAAGAACTGGTGATGTCCAGATCGAACCTAACTACCAAGAACTTGCAAGTGAGAACATACCAACAGTAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTTCATTCACCTGTGTACACACGAACTCCAACCATGTACCTTGTTTTCTCCATGATGCCCGGAACTGAGTGGCATCAGAGCATTCCAGAGTCGTGGAATTCCTTTGTTTATATAATTGAAGGTGAAGGGGTTTTCGGGTGTCCAAGTTCATCCCCAACTGTGGCACACCATGTCCTTGTTTTGAGTCTTGGTGATGGCCTTAGCGTATGGAACAACTCTTCAAAGCCTTTGAGGTTTGTTCTGATTGGAGGGCAACCACTTAACGAGCCAGTTGTTCAGTATGGGCCTTTTGTGATGAACACACAGTCTGAAATTGAGAAGACAATTGAAGACTATCATTATGGGAGGAATGGATTTGAGATGAGGAAGTATTGGAGGTCTCAATAG 555 0.445 MLEGGITHQDFAGHKGTIRTGDVQIEPNYQELASENIPTVEKDGVEVRVIAGEAMGVHSPVYTRTPTMYLVFSMMPGTEWHQSIPESWNSFVYIIEGEGVFGCPSSSPTVAHHVLVLSLGDGLSVWNNSSKPLRFVLIGGQPLNEPVVQYGPFVMNTQSEIEKTIEDYHYGRNGFEMRKYWRSQ 184
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00375 184 SUPERFAMILY RmlC-like cupins 1 182 IPR011051 -
Pumo5g00375 184 PIRSF Pirin 24 182 IPR012093 -
Pumo5g00375 184 PIRSF Pirin 1 25 IPR012093 -
Pumo5g00375 184 Gene3D Jelly Rolls 22 143 IPR014710 -
Pumo5g00375 184 PANTHER PIRIN-RELATED 1 24 IPR012093 -
Pumo5g00375 184 CDD cupin_pirin_C 66 142 - -
Pumo5g00375 184 Pfam Pirin C-terminal cupin domain 69 174 IPR008778 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo5g00375 Pumo-Chr5 8632661 8634213 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00375 1 179 Calmodulin-binding Proteins AT3G59220 51.628 8.14e-72 217
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00375 K06911 - gmx:100775597 332.798