Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g00375 | ATGCTAGAGGGAGGCATAACTCACCAAGATTTTGCTGGGCACAAGGGTACAATAAGAACTGGTGATGTCCAGATCGAACCTAACTACCAAGAACTTGCAAGTGAGAACATACCAACAGTAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTTCATTCACCTGTGTACACACGAACTCCAACCATGTACCTTGTTTTCTCCATGATGCCCGGAACTGAGTGGCATCAGAGCATTCCAGAGTCGTGGAATTCCTTTGTTTATATAATTGAAGGTGAAGGGGTTTTCGGGTGTCCAAGTTCATCCCCAACTGTGGCACACCATGTCCTTGTTTTGAGTCTTGGTGATGGCCTTAGCGTATGGAACAACTCTTCAAAGCCTTTGAGGTTTGTTCTGATTGGAGGGCAACCACTTAACGAGCCAGTTGTTCAGTATGGGCCTTTTGTGATGAACACACAGTCTGAAATTGAGAAGACAATTGAAGACTATCATTATGGGAGGAATGGATTTGAGATGAGGAAGTATTGGAGGTCTCAATAG | 555 | 0.445 | MLEGGITHQDFAGHKGTIRTGDVQIEPNYQELASENIPTVEKDGVEVRVIAGEAMGVHSPVYTRTPTMYLVFSMMPGTEWHQSIPESWNSFVYIIEGEGVFGCPSSSPTVAHHVLVLSLGDGLSVWNNSSKPLRFVLIGGQPLNEPVVQYGPFVMNTQSEIEKTIEDYHYGRNGFEMRKYWRSQ | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g00375 | 184 | SUPERFAMILY | RmlC-like cupins | 1 | 182 | IPR011051 | - | |
Pumo5g00375 | 184 | PIRSF | Pirin | 24 | 182 | IPR012093 | - | |
Pumo5g00375 | 184 | PIRSF | Pirin | 1 | 25 | IPR012093 | - | |
Pumo5g00375 | 184 | Gene3D | Jelly Rolls | 22 | 143 | IPR014710 | - | |
Pumo5g00375 | 184 | PANTHER | PIRIN-RELATED | 1 | 24 | IPR012093 | - | |
Pumo5g00375 | 184 | CDD | cupin_pirin_C | 66 | 142 | - | - | |
Pumo5g00375 | 184 | Pfam | Pirin C-terminal cupin domain | 69 | 174 | IPR008778 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g00375 | Pumo-Chr5 | 8632661 | 8634213 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g00375 | 1 | 179 | Calmodulin-binding Proteins | AT3G59220 | 51.628 | 8.14e-72 | 217 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g00375 | K06911 | - | gmx:100775597 | 332.798 |