Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00346 ATGGACCCCAAGTCAAGGAAGATCCTGCAGCTTTGGCGATTGAGGCAGATTTTCAATGGTGTATTTCTCAAAGTTAACAAAGCCACAATGAACATGCTGCACAAAGTTGAGCCCTATGTGACTTATGGATACCCAAATCTCAAGAGTGTGAGAGAACTTATTTACAAGAGAGGGTATGGAAAGCTAAACAAGCAGAGAACTGCTCTAACTGTTCACAACTCCATCATTGAGCAGGCTCTGGGCAAATATGGAATCATATCCACTGAAGATCTGATCCATGAGATCATCAGTGTTGGACCTCACTTTAAGGAGCCTAACAACTTCCTTTGGCCATTTAAGCTCAAGGCTTTTTTATTTTTTTTTTTTTTTATCCGTAAGAAATCAAAGACAGTACTAAGGTGTTTACAACACTCACACACCCTGCTCAAGGCTCCTTTGGGTGGCTTAAAGAAGAAGATAAACCATTATGTTGAGGGAGGTGACACTGGAAACCGGGAGAATTACATCAATGAGCTAATCAGGAGAATGAATTGA 534 0.4082 MDPKSRKILQLWRLRQIFNGVFLKVNKATMNMLHKVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRTALTVHNSIIEQALGKYGIISTEDLIHEIISVGPHFKEPNNFLWPFKLKAFLFFFFFIRKKSKTVLRCLQHSHTLLKAPLGGLKKKINHYVEGGDTGNRENYINELIRRMN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00346 177 Gene3D - 103 177 IPR036919 -
Pumo5g00346 177 Gene3D - 1 95 IPR036919 -
Pumo5g00346 177 SUPERFAMILY Ribosomal protein L30p/L7e 2 115 IPR036919 -
Pumo5g00346 177 CDD Ribosomal_L7_archeal_euk 1 177 IPR035808 -
Pumo5g00346 177 SUPERFAMILY Ribosomal protein L30p/L7e 142 177 IPR036919 -
Pumo5g00346 177 PANTHER 60S RIBOSOMAL PROTEIN L7 1 177 IPR039699 -
Pumo5g00346 177 Pfam Ribosomal protein L30p/L7e 2 40 IPR016082 -
Pumo5g00346 177 FunFam 60S ribosomal protein L7 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00346 Pumo-Chr5 8027763 8028296 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00346 1 177 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 70.056 2.65e-84 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00346 K02937 - gmx:100813342 248.44