Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00338 ATGGCGAGCCCAGAAGAAGCAAAGCTCGAAACTTTCATGCAGTGGCTACAGGCAAATGGGGTGGAGCTACGAGGTTGCAAGATCAAGTGGTGTGATTCCAAACGAGGGTTTGGCATCTTTTCTGATAGAGATGTTTCTGATGGGGTTATGTTGGTTGTTCCACTAGATTTAGCAATTACTCCAATGAGGGTGTTGCAAGATCCTCTTCTAGGACCAGCATGTAGAGAAATGTTTGAAGAAGGGGATGTAGATGACAGGTTATTAATGATGCTGTTACTGACTGTGGAGCGTTTGCGTAAGAATTCTCTATGGAAGCCGTACCTTGATATGCTTCCAACCACTTTTGGAAATCCACTTTGGTTTAGTGACGATGAACTTCAAGAGCTAAGAGGAACAACATTATATCGTGCAACTGAATTGCAGAAGAAAAGCCTGCTTTCTTTGTATGAAACTAAAGTGAAGGATACAGTGAAGAAACTTTTGACTCTTGATGGAAATTCAGAGATGTATGTGTTGGGTAAAATTACTTGCCTTCTTGCTAGGGCAAATTCAGTATTTTGGAGTCGTGCTTTGAACATTCCAATGCCTCGTTCTTATGTATTTCCAGAAATGCAAGATGCTCATGACAGTAGCGTTCCAGAAGCTGATGAAAAAAGTGGGTCCATCTCTTATTTTTCTCTCGTTAATTTCTTATACAATTCTCTCTTCTACACTGTTTGGGTTGAGGGTCTTGTCCCTGGCATTGACTTTTGTAACCATGATCTGAAGCCAATAGCAACATGGGAAGTTGATGGAACTGGTTTAGCAACAGGAGTTCCTTTCTCCATGTATCTTATTTCTGCTGCTCAAAGTCCCTTGCAGATTGATCAAGAAATTTCCATTAGTTATGGAAACAAGGGAAACGAGGAACTTCTGTATCTGTATGGTTTTGTCATTGATGATAACACAGACGACTATCTCATGGTCCACTATCCAGCAGAAGCGATTAATACAATTTCCTTCGCAGAGTCCAAAAGCCAGCTTCTTGAAGTGCAGAAGGCTGAAAGGAGATGTCTTTTACCCAAAACTTCACTGGATAATGGATTTTTTCCGTTAAACACCCAAAACAGTGAAGAAAATAACAAGTCCAAAGCTGACCAACTTTGTAACTATAGTTGGAGTGGTCAACGCAAGATGCCATCTTATGTAAACAAGCTGGTGTTTCCTGAGAAATTTATGACTACTTTGAGGACCATAGCCATGCAAGAAGATGACCTTTTCAAGGTTTCCTCAATGCTGGAAGAGCTTGAAAGGGAGAGACAGCTATCAGATACAGATGTCCAATCAGCAGTGTGGGAGGTCTGTGGTGATTCTGGAGCTTTACAATTGCTTGTCGATCTTCTTCGTGTGAAGATGATGGATCTTGAAGAGAGTTCCGGAACAGAGGAAAATGACCTTGATTTGCTCAAGAAAGCCCTTGTTATTGATAGCCATGAAGATAGCAAACAATGCATGAGCAATTTAAGCACCAAGGCAAATGACTCAGAGGAACCAAAGTTGATGACTAGAAACAAGTGGTCTGCTATAGTGTATAGGCGTGGCCAGAAACAGCTAACAAGGTTATTCTTGAAAGAAGCAGAACATGCTTTGCAGTTATCTCTGAATGAAGAAGAGGTCACTTCTCCTTGTTAA 1671 0.4111 MASPEEAKLETFMQWLQANGVELRGCKIKWCDSKRGFGIFSDRDVSDGVMLVVPLDLAITPMRVLQDPLLGPACREMFEEGDVDDRLLMMLLLTVERLRKNSLWKPYLDMLPTTFGNPLWFSDDELQELRGTTLYRATELQKKSLLSLYETKVKDTVKKLLTLDGNSEMYVLGKITCLLARANSVFWSRALNIPMPRSYVFPEMQDAHDSSVPEADEKSGSISYFSLVNFLYNSLFYTVWVEGLVPGIDFCNHDLKPIATWEVDGTGLATGVPFSMYLISAAQSPLQIDQEISISYGNKGNEELLYLYGFVIDDNTDDYLMVHYPAEAINTISFAESKSQLLEVQKAERRCLLPKTSLDNGFFPLNTQNSEENNKSKADQLCNYSWSGQRKMPSYVNKLVFPEKFMTTLRTIAMQEDDLFKVSSMLEELERERQLSDTDVQSAVWEVCGDSGALQLLVDLLRVKMMDLEESSGTEENDLDLLKKALVIDSHEDSKQCMSNLSTKANDSEEPKLMTRNKWSAIVYRRGQKQLTRLFLKEAEHALQLSLNEEEVTSPC 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00338 556 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 494 - -
Pumo5g00338 556 Pfam SET domain 36 297 IPR001214 GO:0005515
Pumo5g00338 556 CDD SET_LSMT 32 311 - -
Pumo5g00338 556 ProSiteProfiles SET domain profile. 19 297 IPR001214 GO:0005515
Pumo5g00338 556 Gene3D set domain protein methyltransferase, domain 1 5 311 - -
Pumo5g00338 556 SUPERFAMILY SET domain 8 315 IPR046341 -
Pumo5g00338 556 Coils Coil 412 432 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00338 8 150 NAC Transcription Factor Family AT3G56570 28.966 3.93e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pumo5g00338 SET 4.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00338 - - gmx:100777394 959.903