Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00315 ATGCTTTTGGCAGAGCAAGCTGTTGCCTTTGAACTCGAGGCTACAAAACGTCTAAATGATGCAGAGATTGCCTTACAGCGAGCAGATAAGTCTAATTCTAATTCAAATTCAAATGCTGATACCATAGAAACTACACAAGCACAGGATGTTGAGGATATTCCTGAGGAGGAGAAAGTGGTTCAAGGTTTTTCTGTTGATGTCACTGTTGAAAGAGATAGAGATTTGGCAATTGATGATGAATCTTTGCTTGCCAAGTTATCACCTGAAACACTATCTGATAAAACAAGCCAAATTTTGGAAGACAAAACACAGTCTGATTATTTAAGTGATAATGAGAATGCTGTGCAAACAAAAAAGCAGGAAACACAGAAAGATTTGACCAGAGATAGTTCACCCTTTGCTCCCAAGGCGTTATTGAAAAAGTCTTCTCGATTCTTTTCTGCGTCATTTTTCTCTTTTACTGAAGATGGGACTGAGTTCACACCAGCATCAGTCTTCCAGGGCCTTGTATTATCTGTACAGAAGCGGTTACCCAAGCTGATATTTGGGTTATTATTAATGGGAGCAGGGGCTGCCTTCTATGCTAATAGAGTGGAGAGGAATGCTCAGCTGCTTCCACAGGCAGATGTTATTATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCTCTGGTTAGACAACTTCAGAAACTCCCCAAGAAAATCAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAACGAGGAAGAAGCCTCCCTCTTTGACATGCTCTGGTTATTACTTGCAAGTGTTATATTTGTGCCAATATTTCAAAAGATCCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCCGGTATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCACGTTCATGGGACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTCCTTCTATTCAATATTGGCCTGGAGCTCTCTGTTGAAAGGCTTAGTTCAATGAAGAAATATGTTTTTGGATTAGGCTCTGCACAGGTATTGGCAACTGCTGTAGCTGTGGGCTTGATAGCTCATTATATTTGTGGCCAAGCTGGTCCTGCTGCTATTGTCATTGGGAATGGCCTAGCATTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACATCACGTCATGGACGAGCTACTTTTTCTGTGTTACTTTTTCAGGATCTGGCTGTCGTGGTCTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAGGCACTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCAGGGGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATTTTCTCAGCCAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTCCCAGTCATCGCAGGCGCACTAGGACTCTTAATATGTGGCAAGACTATCTTGGTTACTTTGATGGGTAGAATGTTTGGGATTTCCCTCATTTCTGCCATCAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAGTTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCTGCAGGGGGCCAGCTGATTGCTTCCCGTTTCGAGCAGAATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACTGATGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCCCAACTTCTTTCTGAGCGTCTTATTCCATTTGTCGCACTAGATGTCAGAAGTGATAGAGTGGCAGTTGGGCGTGCTCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTAGAGAGGTCCTACATAAGGTTGGGGCTGAAAGGGCATGTGCTGCAGCAATTACTCTTGATACGCCTGGTGCAAATTATAGAACAGTTTGGGCTTTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTCCGTGCCCATGACGTTGATCATGGATTGAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCCGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTGCTCAGGCTAAACTCCCCACATCGGAGATTGCAGCAACTATAAATGAATTCAGATCTCGACATCTGGCTGAGCTCACAGAGCTGTGTGAAGCCAGTGGAAGTTCTCTTGGTTATGGATTTAATAAAATTATGAGCAAACCCAAATCTCAATCCACAGATTCATTAGATGAGACCCCAGTCTCTGAAGGGACACTGGCAATATGA 2580 0.4364 MLLAEQAVAFELEATKRLNDAEIALQRADKSNSNSNSNADTIETTQAQDVEDIPEEEKVVQGFSVDVTVERDRDLAIDDESLLAKLSPETLSDKTSQILEDKTQSDYLSDNENAVQTKKQETQKDLTRDSSPFAPKALLKKSSRFFSASFFSFTEDGTEFTPASVFQGLVLSVQKRLPKLIFGLLLMGAGAAFYANRVERNAQLLPQADVIMTSVEEVSSSAKPLVRQLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLATAVAVGLIAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVIAGALGLLICGKTILVTLMGRMFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGFNKIMSKPKSQSTDSLDETPVSEGTLAI 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00315 859 MobiDBLite consensus disorder prediction 95 130 - -
Pumo5g00315 859 Pfam Sodium/hydrogen exchanger family 261 631 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pumo5g00315 859 Gene3D - 659 823 - -
Pumo5g00315 859 MobiDBLite consensus disorder prediction 838 859 - -
Pumo5g00315 859 ProSiteProfiles RCK N-terminal domain profile. 663 785 IPR003148 GO:0006813
Pumo5g00315 859 FunFam K(+) efflux antiporter 2 chloroplastic 659 823 - -
Pumo5g00315 859 MobiDBLite consensus disorder prediction 28 48 - -
Pumo5g00315 859 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 42 848 - -
Pumo5g00315 859 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 262 542 IPR004771 GO:0006812|GO:0008324|GO:0016020
Pumo5g00315 859 MobiDBLite consensus disorder prediction 28 52 - -
Pumo5g00315 859 MobiDBLite consensus disorder prediction 101 116 - -
Pumo5g00315 859 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 660 801 IPR036291 -
Pumo5g00315 859 Pfam TrkA-N domain 664 777 IPR003148 GO:0006813
Pumo5g00315 859 Gene3D - 251 639 IPR038770 -
Pumo5g00315 859 FunFam K(+) efflux antiporter 2 chloroplastic 251 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00315 Pumo-Chr5 6942203 6954279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00315 1 859 Inorganic Solute Cotransporters AT4G00630 76.511 0.0 1203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00315 K03455 - gmx:100798822 1451.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00315 5 6942203 6954279 Pumo5g00315 5 6942203 6954279 ECH
Pumo5g00315 5 6942203 6954279 Pumo7g00876 7 15303377 15311858 PCT