Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00289 ATGAGCTCTATACAGGATATGTTAGCGGCAGGAACTGATACTATCCTTGCCGTCATAGACTGGGCTATGACAGAACTCTTGAGGCCCCCAAATGTGATGCAAAAACTACAAGATGAGGTGAGAAGCGTGGTGGCCAGGGACAAGACTCACATAACCGAAGAGGATTTGAATGGCATGCCTTACCTAAAAGCAATTATCAAAGAAACTCTTAGATTACATTCTGCAACTCCAATATTGATTCCAAGGGAATCCATGCAAGACACCAAGGTGATGGGCTATGACATTGCAGCAGGCACACAACCTCTAGAGTTTCAACCGCAGAGACACTTGAAGAGTTCAAAAGATGTCAAAGGACATGATTTTCAATTGATTCCATTTGGAGCTGGAAGGAGGGGGTGTCCAGGAATAGCATTTGCCATGGTTGTGAATGAGTTGGTCCTTGCAAACATTGTGCACCAATTTGATTGGGCAGTGCCTGGTGGAGTGGTGGGGGAGCAGGCATTCGATTTGTCTGAAACTAATGGATTGTCTATTCACAAAAAATTACCTCTTATGGCACTTGCATCACCTCATCATGTGTAA 582 0.4433 MSSIQDMLAAGTDTILAVIDWAMTELLRPPNVMQKLQDEVRSVVARDKTHITEEDLNGMPYLKAIIKETLRLHSATPILIPRESMQDTKVMGYDIAAGTQPLEFQPQRHLKSSKDVKGHDFQLIPFGAGRRGCPGIAFAMVVNELVLANIVHQFDWAVPGGVVGEQAFDLSETNGLSIHKKLPLMALASPHHV 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00289 193 PRINTS E-class P450 group I signature 63 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 PRINTS E-class P450 group I signature 19 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 PRINTS E-class P450 group I signature 123 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 PRINTS E-class P450 group I signature 133 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 PANTHER CYTOCHROME P450 71B11-RELATED 4 189 - -
Pumo5g00289 193 PRINTS P450 superfamily signature 10 27 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 PRINTS P450 superfamily signature 124 133 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 PRINTS P450 superfamily signature 64 75 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 126 135 IPR017972 GO:0005506|GO:0016705
Pumo5g00289 193 Gene3D Cytochrome P450 1 187 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 SUPERFAMILY Cytochrome P450 4 188 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00289 193 Pfam Cytochrome P450 4 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00289 Pumo-Chr5 6487703 6498607 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00289 6 191 Cytochrome P450 AT3G48280 45.588 1.71e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00289 - - gmx:100786425 328.561