Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g00281 | ATGGCAACTGATATGCAGAGGCTTGTTGGAACGAGTGAGGATGATGAAGAAATGGGAATGGATGTGAAAGATGAGGATGACGACGATGATGATTATGAGGAAAATGGAGGCGAGCAGGGAAATGCTTCAGGGATGGTTGAGATTGATGGTGGGAATGGGATAGGAACTGCCACTGGTGACAACAGGTTTCAGCAGCACCAGCAGTTTCAAGAGCAAGTAGGCACCCCAGGTGGAGGTACTCGAAGATCTAGGCCGCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCAAGGATCTTGGCAGGGCTTCGCAGGCATGGCAACTACAATCTAAGAGTCAGGGCTGACATAAATGATGTTATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGTACAACTTTTCCCTCAAGATCTCAGGGTCAAAAGCCAGCTGGTGGTAATTCTACAATTGTCACTTCATCATCTTCCCATGTGGCTTCACAACAGACTCCATCTGCTTCTCTCAGGGGAGTTGCTTCTGGCTATAGGAGCCCTTTAGAGTATAATGCAAGTCAAACAAAAGGTGTTTTTATGCCAACTCCATCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGGTGGGGGATGGAGAAGCACAAAGAGACAATCGTCCTCTGATTGGTGGTTCAATGGATAATGCTGATGATAAGCAGATTGCTGACTTGCCCCCCAGATTACCAGAGCGTGATTTGGCTGGTACCCCATATGTTCCAGTTTATGTGATGCTACCATTAGGGGTGATCAATATTAAATGTGAGCTTGTTGATCCGGATGGTCTACTAAAGCAGCTGAGGGTGTTGAAATCAGTACATGTTGATGGTGTTATGGTAGACTGTTGGTGGGGAATAGTGGAGGCACATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGAGAGCTTAAGCTTAAGCTGCAGGTTGTGATGTCATTTCATGAATGTGGAGGAAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTGACATTTTTTTCACTGATAGAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAATTGATAAGGAACGAGTTTTAAGAGGCCGTACTGCTTTGGAGGTTTACTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAATATTTTGAGGATGGCTTAATCTCCATGATTGAAGTTGGACTGGGTCCATGTGGAGAGCTAAGATACCCATCTTGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGTAAGGGGTCACGCTATTTGGGCTAGAGGGCCAGATAATGCTGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGAAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTAGTTGATCATGGAAACCGGGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGATCTTGCATTGCTGCAAAGTTATCGGGTATTTACTGGTGGTACAAGACTGCAAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCATGCAATCGTGATGGTTATGCCGCAATTATGACCATGTTAAAGAGAAATGGAGTTAGCTTAAACGTTCCCTGTGTTGACTTGCACGCATTGAACCAACATGAGGGCTTTCCAGAGACATTTGCAGATCCTGAGGGATTAGTCTGGCAAGTGTTGAATGCCGGGTGGGATGTTGACCTACCAGTTACCAGTCAGAATGGATTTCCTTGCCTAAACAGAGTTAGCTATAACAAGGTTTTGGATAATGCCAAGCCCATGAATGATCCAGATGGAAGGCACTTTTCATCCTTTACTTACCTGAGGCTTAGTCCACTTCTTATGGAACGACAAAACTTTGTAGAGTTTGAACGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTTCAGTGTCTCCTCGGGAACGTTCCTCTACTACAGAGGCTTCCTGGCTCGTCTGTACGGAAGATATCTGAACTTGTGATTCTCAAACACTGTGGAGTGCTGAATGTTCAGTTTCCTGGCTTGCAGGCTGAGGTTGTTGGCTCTGTTAGCGCTGACGAAGATAATCATCCAGAGTTTCAATTGAAAAGATGTGACTATTTTGGTTTTGTACCCATTATATATCAAGTTTATCGTATCCGTGATGGGAAGAGTTTTGCTACAAGGAAAGTGGATGCAATTCAAAAGGGAAATGTCATATTCACTTTGTTGGCTTCATTTCAGAAGGAAGAATTAGGGTTTCACCACCGGGCAGTGTCTATCCCATCAGCCCCTACTCCAGATAAGCTTTTATCGTTGGAAGAGCTACGTAAGCAACGTCTTATTGACCCTCGTCTGGTTTTCTATGCCATAATGAGAATATTTGTTGCTTCAGAACTTATCGGATCAAGGTTGCTACAAGTGAATTCATTCCCTGGCCCATTGAGATACGGTTCTGTGAACTCTAAAGCTTCAACAAATCAGACCAAATCTCCTCCTAGGTTAGCTTGA | 2685 | 0.4402 | MATDMQRLVGTSEDDEEMGMDVKDEDDDDDDYEENGGEQGNASGMVEIDGGNGIGTATGDNRFQQHQQFQEQVGTPGGGTRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQGQKPAGGNSTIVTSSSSHVASQQTPSASLRGVASGYRSPLEYNASQTKGVFMPTPSPYDLSSSSRSQTSMVGDGEAQRDNRPLIGGSMDNADDKQIADLPPRLPERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLRVLKSVHVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTALEVYFDFMRSFRVEFDEYFEDGLISMIEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEVRGHAIWARGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLSWYSQVLVDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYAAIMTMLKRNGVSLNVPCVDLHALNQHEGFPETFADPEGLVWQVLNAGWDVDLPVTSQNGFPCLNRVSYNKVLDNAKPMNDPDGRHFSSFTYLRLSPLLMERQNFVEFERFVKRMHGEAVLDLQCLLGNVPLLQRLPGSSVRKISELVILKHCGVLNVQFPGLQAEVVGSVSADEDNHPEFQLKRCDYFGFVPIIYQVYRIRDGKSFATRKVDAIQKGNVIFTLLASFQKEELGFHHRAVSIPSAPTPDKLLSLEELRKQRLIDPRLVFYAIMRIFVASELIGSRLLQVNSFPGPLRYGSVNSKASTNQTKSPPRLA | 894 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g00281 | 894 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
Pumo5g00281 | 894 | SUPERFAMILY | (Trans)glycosidases | 261 | 699 | IPR017853 | - | |
Pumo5g00281 | 894 | PANTHER | BETA-AMYLASE 1, CHLOROPLASTIC | 214 | 696 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | MobiDBLite | consensus disorder prediction | 144 | 181 | - | - | |
Pumo5g00281 | 894 | Gene3D | - | 762 | 894 | IPR042171 | - | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 299 | 313 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 559 | 570 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 617 | 639 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 320 | 338 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 577 | 600 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 435 | 457 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 342 | 363 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 508 | 527 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Beta-amylase (glycosyl hydrolase family 14) signature | 542 | 558 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | Pfam | BES1/BZR1 plant transcription factor, N-terminal | 79 | 218 | IPR008540 | - | |
Pumo5g00281 | 894 | Pfam | Thioesterase-like superfamily | 770 | 830 | - | - | |
Pumo5g00281 | 894 | MobiDBLite | consensus disorder prediction | 198 | 252 | - | - | |
Pumo5g00281 | 894 | MobiDBLite | consensus disorder prediction | 198 | 225 | - | - | |
Pumo5g00281 | 894 | Pfam | Glycosyl hydrolase family 14 | 268 | 688 | IPR001554 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | Gene3D | Glycosidases | 256 | 714 | - | - | |
Pumo5g00281 | 894 | SUPERFAMILY | Thioesterase/thiol ester dehydrase-isomerase | 769 | 809 | IPR029069 | - | |
Pumo5g00281 | 894 | MobiDBLite | consensus disorder prediction | 57 | 77 | - | - | |
Pumo5g00281 | 894 | PRINTS | Plant beta-amylase signature | 683 | 697 | IPR001371 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Plant beta-amylase signature | 425 | 434 | IPR001371 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | PRINTS | Plant beta-amylase signature | 668 | 682 | IPR001371 | GO:0000272|GO:0016161 | |
Pumo5g00281 | 894 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g00281 | Pumo-Chr5 | 6339842 | 6352115 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g00281 | 1 | 699 | Glycoside Hydrolase | AT2G45880 | 66.051 | 0.0 | 956 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | BES1 | Pumo5g00281 | Glyco_hydro_14 | 2.8e-101 | CL0058 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g00281 | K01177 | - | gmx:100805560 | 1292.72 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo5g00281 | 5 | 6339842 | 6352115 | Pumo5g00281 | 5 | 6339842 | 6352115 | ECH |