Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00279 ATGTCTTTATTTGCTAGAAGTGTTTCCATACTATGGGTGCTTCTATTGTTATCATCGTCTGTGAACAATGCTATGGCACTGACAGCACTTATTAGGGTTACAAATTCTTTGAGTGGAAATCTGGACTTAATCCTTAAGTGCAACTATGATCCTTATCAGTATATTCTCAAGCCTGGTTATTACCAGGAATGGAACTATTCTACTGAACTCGGACCAATGCCTTGTTCGTTTCAATGGAAATCTGCCAAACACGCGTTTGATCTGTACTTAGAATTACGGGATAGCGGTTGCGATCAGTGCTTTTGGTTTGTAAAACAAGAATCACCATGTAGGTTTACGGGTTATGCAAGAAGTGTTTCCATAGTGTGGGTGGTTTTTATATTGCTACTATGGTTGGTGAACAATGGTATGGCAGTGGATGTATTTGTTAGGGTTGTAAATACATTGGATCCTGAACAGGACTTAACCGTTTATTGCAATATTGATAAAGAACCACATGTTCTCCCCTCTGGTAAATCAGTTGAATGGAACTATTCCTTTAATTCTAGTAGCGGGACATATTCTGCTAATAACGAATTTGGAACGGAACCATTGTATTGCAACTTCCAATGGCAAGGTGCCTTGCACTTCTTTGATTTGTACGTAGTAGTTCGGGATGGAACTTGCAAAGGGCGCTGCTATTGGTATATAAAACAAGATGGACCATGTAGGTACGTGACTGCTCACCCTGTTTGCTTTCAATGGAAATCTTAA 753 0.3958 MSLFARSVSILWVLLLLSSSVNNAMALTALIRVTNSLSGNLDLILKCNYDPYQYILKPGYYQEWNYSTELGPMPCSFQWKSAKHAFDLYLELRDSGCDQCFWFVKQESPCRFTGYARSVSIVWVVFILLLWLVNNGMAVDVFVRVVNTLDPEQDLTVYCNIDKEPHVLPSGKSVEWNYSFNSSSGTYSANNEFGTEPLYCNFQWQGALHFFDLYVVVRDGTCKGRCYWYIKQDGPCRYVTAHPVCFQWKS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00279 250 Pfam Plant self-incompatibility protein S1 143 248 IPR010264 -
Pumo5g00279 250 Pfam Plant self-incompatibility protein S1 31 116 IPR010264 -
Pumo5g00279 250 PANTHER - 143 238 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00279 Pumo-Chr5 6335048 6337203 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00279 193 250 Carbohydrate Esterase AT3G16970 37.879 5.33e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00279 - - gmx:102668321 137.502