Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00276 ATGTCTCTATTTGTGAGAAGCGTTTTCTTACTTTGGTTGCTAACGCTACTCTCAATCAGCAATGCATTGGAAATAGGTGAAAAAACACATGTGAATGTCACAAATGCTTTAGAAGGAGGATTGGACCTAACCCTTCATTGCAAATCTGGTGATGATGATCTTGGGGTGCAGCATCTTCCTCCCAATGCTTCTTTTGGGTGGGGTTTTGCAATTAACTTTTGGCATTCAACGTTGTACTATTGTTCCTTTCAATGGGAAGATGTCTTTCACCGGTTTGATATATTCGATGCAGATAGGGATGACTCCAAATGTGAGATGGACTGTACTTATAGTTGGGCTGTAAAAAAAGATGAACTATGTTTGTCTCTAGCTGAAAAGGAAAGTGATGAGTGCTTTAATTGGAATAAGTGA 411 0.3917 MSLFVRSVFLLWLLTLLSISNALEIGEKTHVNVTNALEGGLDLTLHCKSGDDDLGVQHLPPNASFGWGFAINFWHSTLYYCSFQWEDVFHRFDIFDADRDDSKCEMDCTYSWAVKKDELCLSLAEKESDECFNWNK 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00276 136 PANTHER - 27 123 IPR010264 -
Pumo5g00276 136 Pfam Plant self-incompatibility protein S1 30 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00276 Pumo-Chr5 6246674 6247084 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00276 27 135 Carbohydrate Esterase AT3G16970 35.135 9.69e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00276 - - pvu:PHAVU_011G171500g 123.635