Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00267 ATGGCAAAGAGGTCCCAAAGATTCCCTGTGAATTATGAGAAAGATCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGATTTTCGTCATGCCCGCTTTACTCGGAAGTTGATAGCAGATAAGAGGCATGGCAGCAAGCATGCTGTTGGTACTGCACTTACCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATGAAGAATATAATTTTGACAGAGGAGAGAGTAAGAGACTAACACTGACAACTGATGGTGATAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAGATGATCATTGACCAGGATGAAATAAAGGATCAAGGTAATGCTGAAGTAGAATCAAAGCAATCCAGATTAGGGCGTGAAGACCCCCCAAAGACAGACTCCAAAAGAAAAAAGAAATCTCGCAAGAAAAGCCGTGATATGGATAGCCATGATTTGAATTCAGATGCAATCTTGAAATCTGAATTTTCACATAAACAGCATTCAAGACAACAGTCAAAAGATAATCTAGATTTGGACAAAATAATGGATGATTTTTGTCATGTTGAAGCGGCTTGTTCCATGATGAATGACAATGATGGAAAAATTGATGCACAGTCAAACCAAAAGCATGTTATCTCTGAAAATCTTGCTAATGCAGTCCATGAATTTGCAAATCAGATGAGATTGAATGGGAAAGATCTGCCTGAAGATGGACAATTCCTTAGCTCACGTGAACTCATGGAAGCTCTTCAGGTTATAAGTTCGGATAAGCAATTGTTTCTTAGACTTCTACAAGACCCAAATTCACACTTATTGAAATACATTCAGGAGTTGGAAAATGCTCAAGGGAGAGGTGGCAAAGAAGGCAGTTCAGTTACCGGCTCCAACTGCTCTGAACAAGAACTTGTTAATCTGAAACAAACTAGGGAGATTGCAAACCGCAAGCATCGTAACTTTTTCAGGAAAAAGGTGAAGTCTCAACCAAAAGATCCAACAAATGAAAATGGGAAAACTGAGTTTTCAAATAGAATTGTCATTCTGAAACCTGCACTAACAGGCATGCAAATTTCTGAAAGTGGAAACAACCTTGCCTCATCGCCAAATTCTCATGATATCGCCCAGTACAAAGGTCCTTCAGTGAGAGTTGGTTCTCATTTTTCTCTTACAGAGATAAAAAGGAAATTGAAACATGCTATGGGAAAGGAGAGGCATGGAAACCCTGAAGTGATCCCACGCAAACTCCCTGTTGAACGTCAAAATAAGGTGCCAAGAGGCAAATGCAAAGATAATGCTGGAATGAGATCTCCCAATAAAGACCATTTCTTCATTGAAAAAATTGCAAGACCTATGTTTGATGTTGTGAAAGGAAGCAAGACTGGTACATTGAAAGACTCTGAATTGAATGTGGAACATGAAAGCGGTATTCCCAATCAAAGTGTTTCTAACATATATATTGAGGCTAGGAAACATCTGTGCGAGATGCTAGATAATGCTGATGAGAACACAAACATTTCAAGCAGGCAGATGCCTAAAACCCTTGGGAGAATACTTTCTCTTCCTGAGTACAACTTTTCTCCTCTAGAGAGTCCTGGAAGGGATTTAGAGCGTCATTCTGTGACTGCACAGGCAAGATTTTCTTCCTCAGACAAAACTAGGGAGGTTAGTGAGGATAATTTGTCCCCCAAACCAGCAACATGTATTGGTCTTCCAGATCAGGAAACTAACAATTCAGAGAAGCAGTCAAGCATTTCTGATGAAAGCTCTAATAATAAAGTACAAGAAATTAAGACAGTGTCGAATTTCTCCCATGATGTTGATCATGTCGATACATCTGAAGCCTGTTATCCTGTTAGAGATGAGATAGTTACTGAAGGTAATGTAGAATCTACAAAAGAGAAAAATGATTTTGAATCGTCTTTGGATCCAAATGGCTTCATCACAGGAAAGGACCAAAATATTGATATCTCAGAAATTCCTGATGGTGCAGGATGTTCTGAATGTTTGAATCAGGACATAACAGAAGAGAACCAATCATCATCTCTACCGTCATCTCCTCACTCTTCCGTCACTAAGAAAATTGAAGAGCTAGAAAATGGTACAGATGTATCTGGGCGACCAAGTCCTGTATCTGTTCTTGATACATCATTCTCAGATGATGACTTTGGCCCGGGGCACTCCAGATGTCAACCTGTTAAATTACCAGTACAACCTCTACAAATTCAATTTGAAGAACATGACTCTTCACCTGCGGAACAGTTTGACAGAGGAAATTATAGTTTTGAAGAAAGTGAATTGATATATGACTACATTAAAGCTGTCTTGCATGCCTCTGGCTTGACTACAGATCAATTGTTGATGAAATGCCTTTCCTCAGACAAGATACTAGATACTTCCTTGTTTGATCAGGTAGAGTTCTTCTCGAACCTGCTTTGCCACGATCAGAAGCTCCTATTTGACTCTGTCAATGAAGTTCTCATGGAGATTTGCCAGCATTACTTTGGGGCCTCACCTTGGGTTTCATTTGTAAATCCTAGCACGAGGCTAACTCCGAGTATGAAGAGGGTTACTTTAAAGGTCTGGGAAGGAGTGTGCTGGCATATCCTTCCCTTGCCCCCACTGTGCACTTTAGAGCAAATTGTTAGGAAAGACATGGCAAGAAGGGGAACATGGATGGAGCTTGGACTTGACGCGGAAACAATTGGTTTTGAAATGGGTGAGGCCATTCTTGCTGAACTGATGGAAGACACAATTTTGAGTCTTGTGAGTGAAAATCCAGAAAGTAAAAGTTCTGTGCTTCAATTTGAGTTGAAGGACAATGAGAGCAGCTTCCACTAG 2823 0.3999 MAKRSQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADKRHGSKHAVGTALTKNKFEVLSNLDEEYNFDRGESKRLTLTTDGDKLSVKKLIEEEMIIDQDEIKDQGNAEVESKQSRLGREDPPKTDSKRKKKSRKKSRDMDSHDLNSDAILKSEFSHKQHSRQQSKDNLDLDKIMDDFCHVEAACSMMNDNDGKIDAQSNQKHVISENLANAVHEFANQMRLNGKDLPEDGQFLSSRELMEALQVISSDKQLFLRLLQDPNSHLLKYIQELENAQGRGGKEGSSVTGSNCSEQELVNLKQTREIANRKHRNFFRKKVKSQPKDPTNENGKTEFSNRIVILKPALTGMQISESGNNLASSPNSHDIAQYKGPSVRVGSHFSLTEIKRKLKHAMGKERHGNPEVIPRKLPVERQNKVPRGKCKDNAGMRSPNKDHFFIEKIARPMFDVVKGSKTGTLKDSELNVEHESGIPNQSVSNIYIEARKHLCEMLDNADENTNISSRQMPKTLGRILSLPEYNFSPLESPGRDLERHSVTAQARFSSSDKTREVSEDNLSPKPATCIGLPDQETNNSEKQSSISDESSNNKVQEIKTVSNFSHDVDHVDTSEACYPVRDEIVTEGNVESTKEKNDFESSLDPNGFITGKDQNIDISEIPDGAGCSECLNQDITEENQSSSLPSSPHSSVTKKIEELENGTDVSGRPSPVSVLDTSFSDDDFGPGHSRCQPVKLPVQPLQIQFEEHDSSPAEQFDRGNYSFEESELIYDYIKAVLHASGLTTDQLLMKCLSSDKILDTSLFDQVEFFSNLLCHDQKLLFDSVNEVLMEICQHYFGASPWVSFVNPSTRLTPSMKRVTLKVWEGVCWHILPLPPLCTLEQIVRKDMARRGTWMELGLDAETIGFEMGEAILAELMEDTILSLVSENPESKSSVLQFELKDNESSFH 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00267 940 MobiDBLite consensus disorder prediction 565 587 - -
Pumo5g00267 940 Pfam Domain of unknown function (DUF4378) 764 911 IPR025486 -
Pumo5g00267 940 MobiDBLite consensus disorder prediction 622 641 - -
Pumo5g00267 940 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 916 - -
Pumo5g00267 940 Coils Coil 291 311 - -
Pumo5g00267 940 Pfam Protein of unknown function (DUF3741) 221 265 IPR022212 -
Pumo5g00267 940 MobiDBLite consensus disorder prediction 692 712 - -
Pumo5g00267 940 MobiDBLite consensus disorder prediction 104 130 - -
Pumo5g00267 940 MobiDBLite consensus disorder prediction 522 587 - -
Pumo5g00267 940 MobiDBLite consensus disorder prediction 104 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00267 Pumo-Chr5 6189621 6196010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00267 1 899 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.369 1.70e-112 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00267 - - gmx:100783243 1653.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00267 5 6189621 6196010 Pumo5g00267 5 6189621 6196010 ECH
Pumo5g00267 5 6189621 6196010 Pumo7g00832 7 14792208 14796638 PCT