Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00262 ATGGATGAAGACAAAACCACACAACTCCCCAGAAGAATGACCAGGTCTTCAGCTTCATCTTCTGCATCCACTTCAAATAACGTAGCTGCTGCAAAAGTAAATAGCCTTGAACCACTAACAATCAACGACCTTTTAGTTGGAGGAGATCCCATCAGCCTAGATGATATAATTTCTAGCTTTCCTGGTAGAAGTAGCCAGATTCATGAGATTGTGCGTCTTTTGGGACCTTTGAATTCACCAATGCTTCCTTTGTTCGTATATGGAAGTTCTTCTACCGGGAAAACCAGTATCATTCTTCAGTTATTCAGGCATCTCAACAGGCCTCTTGTTTATTCTAGTTGTAGGACATGTTATAACCAGTGTATCTTGTTTGAATCTATTCTAAATCAGTTACTTCTCCATAGAAAAAATGCTGCCAATGGTTATTCGAATGCAAAACGATGTGAAAGACCATCTGATTTTGTCAATTTTCTTCGAGAAGCATTGACCAATGTCATAAACAATCTGAAGGAGAAGTCCGAGAAGTTGATCTCAAATGAAATGACACAAGGGAAAATTGGAAATATGATCTACTTGGTATTTGACAATTTTCATCTTGTTAGGGAGTGGGATAAGAGTTCTACTATATTGCCCTTGCTGTTTAATCTCTATGATCTGCTAAATATGCCTGAGGTGGGTCTGATTTTTATCAGCAGTACTTCTCCAGATACCTTTTACTCTAACATGGGTTATGTAGAGCCTATCCCCATTTACTTTCCTGATTACACAGAAGAAGATATTCGTCAAATATTATTGAGAAACCAAGTGAACCAGAAGCTATATTCCTCATTTCTGGATGTAGCTCTGAAGTCTTTCTGTGGAATTACTAAGCAGGTTGGTGATTTGTCTGCTGCCTTAAAGCCACTATATGAAAAATATCTTGAACCTTTAAGTGATAAGGGAAAGGGAGTTGCTCCTAATCAAGAGATGAAGCGAAGGCTGCTTGCTCATATCAACCCTCATATTGCCTCCTCTTTGAATGAGATATATAAGGTTTCTTCTCGTTTCTTCAACTGA 1056 0.3835 MDEDKTTQLPRRMTRSSASSSASTSNNVAAAKVNSLEPLTINDLLVGGDPISLDDIISSFPGRSSQIHEIVRLLGPLNSPMLPLFVYGSSSTGKTSIILQLFRHLNRPLVYSSCRTCYNQCILFESILNQLLLHRKNAANGYSNAKRCERPSDFVNFLREALTNVINNLKEKSEKLISNEMTQGKIGNMIYLVFDNFHLVREWDKSSTILPLLFNLYDLLNMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQKLYSSFLDVALKSFCGITKQVGDLSAALKPLYEKYLEPLSDKGKGVAPNQEMKRRLLAHINPHIASSLNEIYKVSSRFFN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00262 351 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 250 317 IPR047088 -
Pumo5g00262 351 Pfam AAA ATPase domain 60 222 IPR041664 -
Pumo5g00262 351 Coils Coil 155 179 - -
Pumo5g00262 351 FunFam Origin of replication complex subunit 5 60 241 - -
Pumo5g00262 351 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 347 IPR020796 GO:0000808|GO:0005634|GO:0006260
Pumo5g00262 351 Gene3D - 60 242 IPR027417 -
Pumo5g00262 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 272 IPR027417 -
Pumo5g00262 351 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00262 Pumo-Chr5 6077319 6080031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00262 3 347 Core DNA Replication Machinery Family AT4G29910 55.072 2.88e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00262 K02607 - gmx:100782175 625.55