Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00261 ATGGATAACGACAAAGCCCCACAAATCCCCAGAAGAATGACCAGGTCTTCAGCTTCATCTTCTGCATCCACTTCAAATAATGTAACTGCAGCAAAAGTAAATAATAGCCTTGAACCTCTAACAATCAAAGACCTTTTAGTTGGAGGAGATCCCATCAACCTATATGACATAATTTCTAGCTTTCCTGGTAGAAGTAGCCAGATTCTTCAGATTGTGCGTCTTATGGGACCTTTGAATTCACCAATGCTTCCTTTGTTCGTATATGGAAGTTCTTCTACCGGAAAAAACAGTATCATTCTTCAATTATTCAGGCATCTCAACAGGCCTCTTGTTTATTCTAGTTGTAGGACATGTTATAACCAGTGTATCTTGTTTGAGTCTATTCTAAATCAGTTACTTCTCCATAGAAAAAATGCTGCCAATGGTTATTCGAATGCAAAACGTTGTGAAAGACCATCTGATTTTGTTAATTTTCTTCGCGAAGCATTGACCAATGTTATAAACAGTCTGAAGGAGAAGTCCGAGAAGTTGATCTCAAATGAGATGACACAAAGGAAAATTGGAAATATGATCTACTTGGTATTTGACAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGTTCTACTATATTGCCCTTGCTGTTTAATCTCTATGATCTGCTAAATATGCCTGAGGTGGGTCTGATTTTTATCAGCAGTACTTCTCCAGATACCTTTTACTCTAACATGGGTTATGTAGAGCCTATCCCCATTTACTTTCCTGATTACACAGAAGAAGATATTCGTCAAATATTATTGAGAAACCAAGTGAACCAGAAGCTATATTCATCATTTCTGGACAATGTTCTGAAGTCTTCCTGTGGAATTACTAAGCAGGTTGGTGATTTGTCTGCTGCCTTAAAGCCACTATATGAAAAATATCTTGAACCTTTAAGTGATGAGGAAAAGGGAGTTGCTCCTAATGAAGAGATGAAGAACAAGCTGAGCATACATATCAAGCCTCATATTGCCTCCGCTTTGAATGAGATATTTAAGGTTTCATCTCTTTCTTCAACTGAAGTAGAGACCTGTAAAAAGCGGAAGGGAAATCCCAGGAGATTGGAGCAATCTGAAGAACGCAGTCTTGATTTTCATATGTCTACTAGTGCAAAGTATCTTCTGGTTTCAGCATTCCTTGCCTCCAGAAACCCAGCTACTCTCGATGCTTCACTTTTTGATCCCACAGGTGGTTCTGATAATCGGAAGCGAAAGAGGAAGCCCTCTCAGAAAGCGCTGCAAAGGAAGGAAACTTCAGAAGAGGAGCTACTAATGAAAGGACCTGGAACTTTCCCATTGGAGAGGTTGTTAGCCATCTTTCAGTGCCTTATATCAGTTGCAGAAGAGTCATCCAATGAATTAGGAGTTGAAGGTGGCAATGATGTTCTTCTGCAGCTATCCAGTCTCTGCAATGCTAACTTTATATTCAAAGGAAGAAGCTGTCCAATTGAAGGCTCAACCCGGTATCGATCAACCATATCTGAAGACTTTGCTTTCAAGGTGACATATCTTTGTCTCATCCAACACTCCCTCAAAATTCTTTGTGTCAAGGGTGTATACAACCTCTACTGTCCTAAGAATGCTTGA 1623 0.3956 MDNDKAPQIPRRMTRSSASSSASTSNNVTAAKVNNSLEPLTIKDLLVGGDPINLYDIISSFPGRSSQILQIVRLMGPLNSPMLPLFVYGSSSTGKNSIILQLFRHLNRPLVYSSCRTCYNQCILFESILNQLLLHRKNAANGYSNAKRCERPSDFVNFLREALTNVINSLKEKSEKLISNEMTQRKIGNMIYLVFDNFQLVREWDKSSTILPLLFNLYDLLNMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQKLYSSFLDNVLKSSCGITKQVGDLSAALKPLYEKYLEPLSDEEKGVAPNEEMKNKLSIHIKPHIASALNEIFKVSSLSSTEVETCKKRKGNPRRLEQSEERSLDFHMSTSAKYLLVSAFLASRNPATLDASLFDPTGGSDNRKRKRKPSQKALQRKETSEEELLMKGPGTFPLERLLAIFQCLISVAEESSNELGVEGGNDVLLQLSSLCNANFIFKGRSCPIEGSTRYRSTISEDFAFKVTYLCLIQHSLKILCVKGVYNLYCPKNA 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00261 540 Gene3D - 61 242 IPR027417 -
Pumo5g00261 540 MobiDBLite consensus disorder prediction 10 27 - -
Pumo5g00261 540 MobiDBLite consensus disorder prediction 355 374 - -
Pumo5g00261 540 FunFam Origin of replication complex subunit 5 61 242 - -
Pumo5g00261 540 Coils Coil 160 180 - -
Pumo5g00261 540 MobiDBLite consensus disorder prediction 1 27 - -
Pumo5g00261 540 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 251 512 IPR047088 -
Pumo5g00261 540 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 286 IPR027417 -
Pumo5g00261 540 MobiDBLite consensus disorder prediction 402 434 - -
Pumo5g00261 540 Pfam AAA ATPase domain 61 223 IPR041664 -
Pumo5g00261 540 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 53 513 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00261 Pumo-Chr5 6063477 6065655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00261 4 514 Core DNA Replication Machinery Family AT4G29910 54.857 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00261 K02607 - gmx:100782175 844.343