Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00255 ATGGGTTATCTGAGCAAAGCTTCCAAAACCCTAAGGCAATCGAATTACCTATCGTTGTTGTGCAATTTCAATTTCAATTTCAACCCATTAACCAACAGAATAACCCATGAACGCTTTTCTGTGACGCGTGCACTGTTGTGTTCTCAGTCACGCCCAAACAGCACCACGAGAGAGAAAAGCACCATAGATTTGAGCCAATGTCCAACAGAGCTCGTTAGAAATTTCTCAATCATTGCACACGTTGATCATGGCAAGTCCACCCTCGCTGACCGGCTTCTAGAACTCACTGGAACCATTAAGAAAGGCCATGGCCAACCCCAGTATCTTGATAAGTTGCAGGTGGAGAGAGAAAGAGGAATCACAGTTAAAGCCCAGACAGCAACAATGTTCTATAAGCACAGCATAAATGGTGATGATTGCGGTGATGCAAAGGAGTCACCTAAGTTTTTGCTGAATCTTATTGACACTCCTGGACATGTTGATTTTAGTTATGAAGTGTCAAGGTCACTGGCAGCTTGTCAGGGTGTGCTTTTGGTTGTTGATGCTGCTCAGGGAGTCCAAGCACAAACTGTTGCTAACTTTTACCTTGCCTTTGAGTCTAACCTAACAATTGTGCCTGTTATAAACAAGATTGACCAGCCAACTGCTGATCCTGATCGCGTTAAAGCCCAATTGAAATCAATGTTTGATCTTGACCCAAGTGATGCACTGCTAACATCTGCTAAAACTGGAGAGGGTCTTGAGCAAATTCTTCCAGCAGTCATAGAGCGCATACCTGCCCCTCCTGGGAGGAGTGATTCTCCTTTACGCATGCTTTTGCTTGATTCATATTATGATGAATACAAAGGGGTAATATGCCATGTTGCTGTTGTTGATGGTGTCCTGCGCAAGGGGGATAAGATTTCTTCTGCAGCTACTGGTCAGTCATATGAAGCTTCAGATATAGGCATCATGCATCCTGAACTTACACCTACTGGAATCTTGCGTACTGGACAAGTTGGTTATGTTGTAAGTGGCATGCGGTCAACTAAGGAGGCCCGTGTTGGTGATACAATTTACCATACCCGGAGTACTGTAGAGCCTCTTCCAGGCTTCAAGCCAGCAAAACATATGGTGTTCTCTGGTCTTTATCCAGCTGATGGATCTGATTTTGAAGCTCTAAATCACGCAATAGAGAGGCTGACATGCAATGATGCCAGTGTCTCTATTACTAAAGAAACTAGCACTGCTCTAGGTCTGGGGTTCAGGTGTGGGTTTTTAGGCCTTCTGCACATGGATGTTTTTCATCAACGGCTTGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCTACTGTGCCATATATATTTGAGTTTTCTGATGGAAGCAAGTTAGAAGTTCAGAATCCTGCTTCATTACCCTCTAATCCCAAGCATAAAGTGACAGCCTGTTGGGAACCTACAGTATTAGCTACTATAATCATTCCTAGTGAGTATGTGGGACCTGTTATTACCCTTGTCTCTGAGCGTAGAGGTCAGCAGTTAGATCAACGGGTATTCATGAAGTACCGCCTGCCTTTGAGAGAAATTGTTGTTGACTTTTATAATGAATTGAAGAGTATAACATCAGGCTATGCATCGTTTGATTATGAGGACTCAGATTATCAACAAGCTGATATGGTGAAACTGGACATTCTCTTGAATGGACAACCAGTTGATGCAATGGCAACCATAGTTCATAACGCGAAAGCATATCGTGTTGGGCGTGAGCTGACAGAGAAATTGAAGAGCGTCTTAGACAGGCAAATGTTCGAGGTGAGCATACAAGCCGCCATTGGGGCAAAAATCATAGCAAGGGAGACGATTTCCGCAATGAGGAAAAATGTTCTTGCCAAGTGTTATGGTGGTGACGTTACTCGAAAAAGGAAGCTATTGGAGAAGCAAAAGGAAGGAAAGAAGCGAATGAAGCGTGTTGGTTCTGTCGATATACCACAAGAAGCATTTCATGAACTATTGAAGGTTTCTTAG 2010 0.4348 MGYLSKASKTLRQSNYLSLLCNFNFNFNPLTNRITHERFSVTRALLCSQSRPNSTTREKSTIDLSQCPTELVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATMFYKHSINGDDCGDAKESPKFLLNLIDTPGHVDFSYEVSRSLAACQGVLLVVDAAQGVQAQTVANFYLAFESNLTIVPVINKIDQPTADPDRVKAQLKSMFDLDPSDALLTSAKTGEGLEQILPAVIERIPAPPGRSDSPLRMLLLDSYYDEYKGVICHVAVVDGVLRKGDKISSAATGQSYEASDIGIMHPELTPTGILRTGQVGYVVSGMRSTKEARVGDTIYHTRSTVEPLPGFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSITKETSTALGLGFRCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEFSDGSKLEVQNPASLPSNPKHKVTACWEPTVLATIIIPSEYVGPVITLVSERRGQQLDQRVFMKYRLPLREIVVDFYNELKSITSGYASFDYEDSDYQQADMVKLDILLNGQPVDAMATIVHNAKAYRVGRELTEKLKSVLDRQMFEVSIQAAIGAKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDIPQEAFHELLKVS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00255 669 Gene3D Translation factors 265 362 - -
Pumo5g00255 669 SUPERFAMILY EF-G C-terminal domain-like 479 567 IPR035647 -
Pumo5g00255 669 CDD lepA_C 480 553 IPR035654 -
Pumo5g00255 669 Gene3D - 70 263 IPR027417 -
Pumo5g00255 669 Pfam Elongation factor G C-terminus 480 558 IPR000640 -
Pumo5g00255 669 Pfam GTP-binding protein LepA C-terminus 561 667 IPR013842 -
Pumo5g00255 669 Pfam Elongation factor Tu GTP binding domain 72 259 IPR000795 GO:0003924|GO:0005525
Pumo5g00255 669 Gene3D Elongation Factor G (Translational Gtpase), domain 3 363 444 - -
Pumo5g00255 669 PRINTS GTP-binding elongation factor signature 74 87 IPR000795 GO:0003924|GO:0005525
Pumo5g00255 669 PRINTS GTP-binding elongation factor signature 204 213 IPR000795 GO:0003924|GO:0005525
Pumo5g00255 669 PRINTS GTP-binding elongation factor signature 117 125 IPR000795 GO:0003924|GO:0005525
Pumo5g00255 669 PRINTS GTP-binding elongation factor signature 152 162 IPR000795 GO:0003924|GO:0005525
Pumo5g00255 669 SUPERFAMILY EF-G C-terminal domain-like 371 448 IPR035647 -
Pumo5g00255 669 PANTHER TRANSLATION FACTOR GUF1-RELATED 49 668 IPR006297 GO:0005525
Pumo5g00255 669 FunFam Translation factor GUF1, mitochondrial 445 551 - -
Pumo5g00255 669 FunFam Translation factor GUF1, mitochondrial 553 627 - -
Pumo5g00255 669 CDD EF4_III 370 445 - -
Pumo5g00255 669 NCBIfam translation elongation factor 4 72 668 IPR006297 GO:0005525
Pumo5g00255 669 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 70 262 IPR000795 GO:0003924|GO:0005525
Pumo5g00255 669 Hamap Elongation factor 4 [lepA]. 68 669 IPR006297 GO:0005525
Pumo5g00255 669 FunFam Elongation factor 4 69 263 - -
Pumo5g00255 669 CDD EF4_II 269 354 - -
Pumo5g00255 669 SUPERFAMILY Translation proteins 260 357 IPR009000 -
Pumo5g00255 669 FunFam Translation factor GUF1, mitochondrial 363 444 - -
Pumo5g00255 669 CDD LepA 73 261 - -
Pumo5g00255 669 NCBIfam small GTP-binding protein domain 76 250 IPR005225 GO:0005525
Pumo5g00255 669 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 110 125 IPR031157 -
Pumo5g00255 669 FunFam Translation factor GUF1, mitochondrial 264 362 - -
Pumo5g00255 669 Gene3D - 445 552 - -
Pumo5g00255 669 Gene3D - 553 627 IPR038363 -
Pumo5g00255 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 283 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00255 Pumo-Chr5 6022207 6026518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00255 72 213 Eukaryotic Initiation Factors Gene Family AT1G56070 40.278 3.33e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00255 K21594 - gmx:100781092 1266.14