Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00232 ATGGCGAAAGGTACTAGAAATGAGTTGAACATTCCAATGAACACCACAAGAAACAATGGCAAAATGACTTCACAAGTGCTAGAAGACAAGTACGAGAAACGCTTGAAAACTGTGCAACAACGTGTTACATTTTTTGTGCATGTGGCCACTGTGTTTCTTTGGATTATCATCGAAATATGGTGCCAACTTCAGCAGCATGGCCCCATTTTCGTCCGGTCCTCTTTGCTCGAGCTGCTCGGCATTTTGGTGTATTTTTTTTCCATTGTGGTAATGATGAATGCTGGTGCATCATTTCCTACCTGGCTGATGGCTATGGATGCGTTTTTCGTCATTATGTTCCGCGCCAGAACTGTTGAATCACTCACTGAACTGTACTTTCCAATTTTGGTAATCCTTCTCCTGTGCTGGTGTGTGCTTGAGGAAGAGCAGCCACCACATGAACATGAAGGAAGAAGGGATGTGGAAAATCCGGTGGTGTTTTGGAATGTGTCACATGTAGGTCTTACCAAGAAGAATGTATTTGTATTGATTTGCATAAACATTGCTTTTGGTAGTAGGAAGCGACGTGATTTGATTAGAGAGACTTGGATGCCTCAAGGCCTTTGTCATACCATAGTGCAAGCTACTCTGGCTAGAATAATGTTGTTTTCTGCCTCAATCACCAGACAGACAGACATGGCTCTTGAGTCAGCTTCTGCTTCAGCTGACATCAGAGGAGTTCCCACTCATGACGGACGCTATCTTCAGTACAATATCTATGGCAACCTCTTTGAGGTCTCTAGGAAGTATGTTCCTCCTATTCGCCCTGTGGGAAGAGGAGCATATGGTATTGTTTGTGCTGCTGTAAATGCAGAGACACGTGAAGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCCTACGAGAAATTAAACTTCTTCGGCACATGGATCATGAAAATGTGATAGCCCTTAAAGACATTATACGACCACCACAGAGGTATAACTTCAATGATGTGTACATTGTTTATGAGTTAATGGATACTGATCTGCATCAAATAATTCGATCCAGTCAACAATTGACTGATGATCATTGTCGGTATTTTCTGTATCAGTTGCTACGAGGGCTCAAATATGTACACTCAGCAAATGTTCTGCACCGTGATCTAAAGCCTAGCAACTTGCTACTGAATGCCAACTGTGATCTTAAGATTGCAGACTTTGGTCTCGCTAGAACTACATCTGAGACTGATTTCATGACTGAGTATGTGGTTACTCGGTGGTACCGAGCTCCAGAGTTACTTCTTAATTGCTCAGAATATACTGCTGCCATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATCATAACAAGACAACCCCTATTTCCGGGGAAAGATTATGTTCATCAGCTCAGGCTGATTACAGAGCTCATAGGCTCACCTGATGACACTAGCCTTGGATTTCTACGAAGTGATAATGCTCGGAGATATGTGAGACAGCTTCCACAATATCCAAGGCAACAATTTGCTGCTAGATTTCCAAGTATGTCTCCTGGTGCTGTTGATTTGTTAGAGAAGATGCTTGTCTTTGATCCAAATAGGCGCATCACAGTTGAAGAAGCTCTGTGTCACCCATACTTGGCACCCCTTCATGATATTAATGAGGAACCTGTTTGCGTTAGACCTTTCAGTTTTGATTTTGAGCAACCATCTTTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGTTATTCAATCCTGATCCACCTATTTATTGA 1797 0.4229 MAKGTRNELNIPMNTTRNNGKMTSQVLEDKYEKRLKTVQQRVTFFVHVATVFLWIIIEIWCQLQQHGPIFVRSSLLELLGILVYFFSIVVMMNAGASFPTWLMAMDAFFVIMFRARTVESLTELYFPILVILLLCWCVLEEEQPPHEHEGRRDVENPVVFWNVSHVGLTKKNVFVLICINIAFGSRKRRDLIRETWMPQGLCHTIVQATLARIMLFSASITRQTDMALESASASADIRGVPTHDGRYLQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVIALKDIIRPPQRYNFNDVYIVYELMDTDLHQIIRSSQQLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIITRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQYPRQQFAARFPSMSPGAVDLLEKMLVFDPNRRITVEEALCHPYLAPLHDINEEPVCVRPFSFDFEQPSFTEEDIKELIWRESVLFNPDPPIY 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00232 598 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 262 551 - -
Pumo5g00232 598 SUPERFAMILY Protein kinase-like (PK-like) 267 557 IPR011009 -
Pumo5g00232 598 SMART serkin_6 264 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00232 598 ProSitePatterns Protein kinases ATP-binding region signature. 270 294 IPR017441 GO:0005524
Pumo5g00232 598 Gene3D Phosphorylase Kinase; domain 1 247 587 - -
Pumo5g00232 598 FunFam Mitogen-activated protein kinase 249 358 - -
Pumo5g00232 598 FunFam Mitogen-activated protein kinase 348 577 - -
Pumo5g00232 598 ProSitePatterns MAP kinase signature. 299 402 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pumo5g00232 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 386 398 IPR008271 GO:0004672|GO:0006468
Pumo5g00232 598 CDD STKc_TEY_MAPK 257 593 - -
Pumo5g00232 598 ProSiteProfiles Protein kinase domain profile. 264 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00232 598 Gene3D Transferase(Phosphotransferase) domain 1 348 577 - -
Pumo5g00232 598 Pfam Protein kinase domain 268 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00232 Pumo-Chr5 5584478 5596822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00232 230 593 MAP Kinase Gene Family AT4G01370 87.363 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pumo5g00232 Pkinase 1.9e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00232 K20600 - gmx:100815697 742.265