Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00205 ATGGAAAGCCAAGACCCACCAAACCCACCACCACCTCCATTAGTACTACCACCCCAAAACAACCCCTTCCTATTCACGCCTTTGCAAAACCCTTTGGACCCTCAAGAGGAAGGGTTATGTGACATTGACTGGGGTAACCTTTTCTCTACCCAAAACAACTTATTGCTTAATGGGGATGATGCCAAAGATGCAATTGAATGTGGTTCTTCTTCGTCTTCTTTTGTGGCTCAAAATAAGGGAGGTTGTGAGGAGGAAAAGGGAAACAAGGAGAGAAGGAAAGGGGGGAGGTTGAAGAAAACAACACGAGTGCCAAGGTTTGCGTTTCAAACAAGGAGTGCGAATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGGCAGAAAGCTGTGAAGAATAGCACATATCCCAGAAGCTACTACCGCTGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACAAGCATTGTGGTGACGACTTACGAGGGAATTCACAACCACCCGTGCGAGAAGCTCATGGAAACTCTAACCCCTCTTCTCAAGCAAATACAGTTTCTTGCTAGCTTGTAA 591 0.4552 MESQDPPNPPPPPLVLPPQNNPFLFTPLQNPLDPQEEGLCDIDWGNLFSTQNNLLLNGDDAKDAIECGSSSSSFVAQNKGGCEEEKGNKERRKGGRLKKTTRVPRFAFQTRSANDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00205 196 SUPERFAMILY WRKY DNA-binding domain 110 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo5g00205 196 Gene3D WRKY domain 102 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo5g00205 196 ProSiteProfiles WRKY domain profile. 112 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00205 196 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 74 178 IPR044810 GO:0003700
Pumo5g00205 196 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g00205 196 MobiDBLite consensus disorder prediction 77 97 - -
Pumo5g00205 196 Coils Coil 193 196 - -
Pumo5g00205 196 FunFam WRKY transcription factor 57 103 177 - -
Pumo5g00205 196 SMART WRKY_cls 117 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00205 196 MobiDBLite consensus disorder prediction 1 23 - -
Pumo5g00205 196 Pfam WRKY DNA -binding domain 118 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00205 Pumo-Chr5 5127536 5129659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00205 90 196 WRKY Transcription Factor Family AT5G41570 71.028 5.62e-56 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo5g00205 WRKY 2.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00205 - - gmx:100796481 297.745