Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00190 ATGGAGCCTAAGCCTAGCTTTGTGGTTCCACTTCCATTCATGCTCCTCATTACTCACTGGTTTCTATTGGCTCTTCATGGCAGTGCTGAGAGTTCCACATATATAGTCCACATGGACAAATCCCTTTTTCCTCATGTTTTCACAACCCATCATGATTGGTTTGAATCCACCATTGATTCCATTAAATCAGCAACACTTGGTCACTCATCCAAGCAATCACAGAAACTAGTGTACTCCTATAACCATGGCATGTATGGTTTTAGTGCTGTACTAACTTCAGAAGAGTTAGAGGCTGTTAAGAACTCTCATGGTTTTCTTGCAGCATATCCAGACAGAAATGTCACCATAGACACCACTCACACTTCTCAATTTCTCTCCCTAGACTCTTCCAGTGGTCTATGGCATGCCTCAAATTTTGGGGAGGATGCCATTGTGGGAGTTATTGACACTGGTGTGTGGCCTGTGAGTGAAAGCTTTAAAGATGATGGCATGACCAAGAAAATTCCAAACAAATGGAAAGGGACCTGTGAGGAAGGCCAAGACTTCAACACTTCCATGTGCAACTTCAAACTTATTGGAGCTAGATATTTCAACAAAGGTGTGATTGCTGCAAATTCCAAGGTTAAAATCAGCATGAACTCAGCTAGAGACACTATGGGTCATGGAACTCACACATCATCAACAATTGCTGGCAACTATGTTAGTGGGGCCTCTTACTTTGGCTATGCTAAAGGGGTGGCTAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTCGTTTGGGAAGAGGGTCGTGTAGCCTCTGATGTTATGGCTGGAATGGACCAAGCCATTGCTGATGGGGTTGATGTGATTTCCATCTCTATGGGGTTTGATGGTGTTCAACTTTATGAGGACCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCTTCTGCAGGTAACAATGGTCCTGATCTTGGTACCTTGCACAATGGAATCCCCTGGCTTCTGACTGTGGCTGCAGGCACCATAGACCGCTCATTTGGTACTCTAGTTCTTGGAAATGGCCAAACCATAATTGGTTGGACCTTGTTTCCAGTAAATGCCTTGGTGGAAAATCTTCCACTTATCTATAATAAGAGTATATCAGCATGTAACTCAGTCAAGCTGTTATCTAAAGTGGCCACAAAAGGGATCATTATATGTGATTCAGAGCCAGACCCTGACTTAATGTTTAAGCAAATGTGGTTGGTTAATGAAGCCAGTTTGTTAGGGGCAGTGTTTATCTATAATTCTCCTTTATTAAATGAAACAGACACTGTCAGCTCTCCAAGTATTATAATCAGTGCACAAGATGCACCATCTGTGATCAAGTATGCAAAAAGCCACAAGAAGCCAACAGCCACCATCAGATTTCAACAAACATTTGTTGGAATAAAGCCAGCACCAGCTGTTACCCTTTACTCTTCAAGAGGTCCCTCACCTACCTATGCTGGGGTCTTGAAGCCTGACATAATGGCACCTGGAGATAATGTTCTTGCTGCATATGTTCCTACAGAACCAGCCGCTACAATTGGCACCAATGTGATGTTATCCAGTGACTACAGTTTTCTGTCTGGAACATCCATGGCATGCCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACCCTCAATGGAGTGCTGCTGCTACAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTAGATAATACACAAAATCCAATTAGGGACTATGGTTACCCTTCTCAATATGCTTCCCCTCTTGCCATTGGAGCTGGTCAAATTGACCCTAATAAAGCACTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTATGTTAATCTCCTTTGTGCTTTGAAGTACACACAAAAGCAAACCTTAACCATTACAAGATCACCCTTTTACAACTGTGCAAAACCATCGTTTGATCTTAATTACCCTTCATTTATAGCTTTCTACGGCAACAAAACAAGGTCAGTTGTCCACAAGTTTAGGAGGACTGTGACCAATGTTGGAGATGGTGCTGCCACATACAGAGCCAAGGTGACATAA 2094 0.4336 MEPKPSFVVPLPFMLLITHWFLLALHGSAESSTYIVHMDKSLFPHVFTTHHDWFESTIDSIKSATLGHSSKQSQKLVYSYNHGMYGFSAVLTSEELEAVKNSHGFLAAYPDRNVTIDTTHTSQFLSLDSSSGLWHASNFGEDAIVGVIDTGVWPVSESFKDDGMTKKIPNKWKGTCEEGQDFNTSMCNFKLIGARYFNKGVIAANSKVKISMNSARDTMGHGTHTSSTIAGNYVSGASYFGYAKGVARGIAPRARLAMYKVVWEEGRVASDVMAGMDQAIADGVDVISISMGFDGVQLYEDPIAIASFAAMEKGVVVSSSAGNNGPDLGTLHNGIPWLLTVAAGTIDRSFGTLVLGNGQTIIGWTLFPVNALVENLPLIYNKSISACNSVKLLSKVATKGIIICDSEPDPDLMFKQMWLVNEASLLGAVFIYNSPLLNETDTVSSPSIIISAQDAPSVIKYAKSHKKPTATIRFQQTFVGIKPAPAVTLYSSRGPSPTYAGVLKPDIMAPGDNVLAAYVPTEPAATIGTNVMLSSDYSFLSGTSMACPHASGVAALLKAAHPQWSAAATRSALVTTASPLDNTQNPIRDYGYPSQYASPLAIGAGQIDPNKALDPGLIYDATPQDYVNLLCALKYTQKQTLTITRSPFYNCAKPSFDLNYPSFIAFYGNKTRSVVHKFRRTVTNVGDGAATYRAKVT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00190 697 FunFam Subtilisin-like protease SBT1.9 24 117 - -
Pumo5g00190 697 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Pumo5g00190 697 CDD PA_subtilisin_like 352 472 - -
Pumo5g00190 697 Gene3D Peptidase S8/S53 domain 142 626 IPR036852 GO:0004252|GO:0006508
Pumo5g00190 697 Gene3D - 347 479 - -
Pumo5g00190 697 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 696 IPR045051 -
Pumo5g00190 697 ProSiteProfiles Serine proteases, subtilase domain profile. 121 613 - -
Pumo5g00190 697 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 116 IPR037045 -
Pumo5g00190 697 SUPERFAMILY Subtilisin-like 117 617 IPR036852 GO:0004252|GO:0006508
Pumo5g00190 697 Pfam Fibronectin type-III domain 657 697 IPR041469 -
Pumo5g00190 697 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Pumo5g00190 697 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Pumo5g00190 697 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Pumo5g00190 697 CDD Peptidases_S8_3 114 578 IPR034197 -
Pumo5g00190 697 Pfam Peptidase inhibitor I9 33 116 IPR010259 -
Pumo5g00190 697 FunFam Subtilisin-like protease SBT1.5 142 356 - -
Pumo5g00190 697 Pfam Subtilase family 140 589 IPR000209 GO:0006508|GO:0008236
Pumo5g00190 697 Gene3D - 630 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00190 Pumo-Chr5 4877149 4879242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00190 14 696 Subtilisin-like Serine Gene Family AT5G67090 42.959 5.04e-175 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00190 - - gmx:100779169 1262.67