Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00189 ATGGAGCCTAAGCCTAACTTTGTGTTTCCAGTTCCATTTATGTTCCTAATTGCTCACTGGTTTCTATTGCCTCTTCATGGCAGTGCTGAGAGTTCCACATATATAGTCCACATGGACAAATCCCTCTTTCCTCATGTTTTCACAACCCATCATGATTGGTTTGAATCCACCATTGATTCCATAAAATCAGCAACACTTGGTCACTCATCCAAGCAATCACAGAAAATGGTGTACTCTTATAACCATGCCATGTATGGCTTTAGTGCTGTACTATCTTCAGAAGAGTTAGAGGCTGTTAAGAACTCTCATGGTTTTGTTGCAGCATATCCAGACAGAAATGTCACCATAGACACCACTCACACTTTTGAATTTCTCTCCCTAGACTCTTCTAGTGGCTTATGGCAAGCCTCAAATTTTGGGGAGGATGTCATTGTGGGTGTTATTGACACTGGTGTGTGGCCTGAGAGTGAAAGCTTTAAAGATGATGGAATGACCAAGAAAATTCCAAACAAATGGAAAGGGACCTGTGAGGAAGGGCAAGACTTCAACACTTCCATGTGCAACTTCAAACTGATTGGAGCTAGATATTTCAACAAGGGTGTGATTGCTGCAAATTCCAAGGTTAAAATCAGCATGAACTCAGCTAGAGACACCTCAGGTCATGGAACTCACACATCATCAACAGTTGCTGGCAACTATGTTAGTGGAGCCTCTTACTTTGGTTATGCTAAAGGGGTGGCCAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTGACTTGGAAAGAGGGTCGTGTAGCCTCTGATGTTATGGCTGGAATGGACCAAGCAATTGCTGATGGGGTTGATGTGATTTCCATCTCTATGGGGTTTGATGGTGTTCCACTTTATGAGGACCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCTTCTGCTGGTAACTTTGGTCCTGATCTTGGTACCTTGCACAATGGAATCCCCTGGCTTCTGACTGTGGCTGCAGGCACCATAGACCGCACATTTGGTACTCTAATTCTTGGAAATGGCCAAACCATTATTGGTTGGACCTTGTTTCCAGCAAATGCCTTGGTGGAAAATCTTCCACTTATCTACAATAAGAATACATCAGCATGTAACTCAGTCAAGCTGTTATCCAAAGTGGCCACACAAGGGATCATTCTATGTGACTCAGTGTCAGACCCTGAGTTAATGTTTAACCAAAGGTTGTTTGTTAATGAAGCCAGTTTGTTAGGGGCAGTGTTTATCTCTGGTCAACCGTTATTAAAAGAAGGACATGTCAGATCTCCAAGTATTGTAATCAGTGCACAGGATGCACCATCTGTGATCAAGTATGCAAAAAGCCACAAGAAGCCAACAGCCACCATCAAATTTCAGCAAACATTTGTTGGAATAAAGCCAGCGCCAGCTGCTGCCTCTTACACTTCAAGAGGTCCTTCACCTAGCTATCCTGGGGTCTTGAAGCCTGACATAATGGCACCTGGCTCTAATGTTCTTGCTGCTTTCATTCCTAATAGGGGAGCAGCTAGAATTGGCACCAATGTGATCTTACCTAGTGACTACAGTTTGCTGTCTGGAACATCCATGGCATGCCCGCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACCCTCAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTAGATAATACCCAAAATCCAATTAGGGACTTTGGTTACCCTTCTCAATATGCTTCCCCTCTTGCCATTGGAGCTGGTCAAATTGACCCTAATAAAGCACTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTATGTTAATCTCCTTTGTGCTTTGAAGTACACACAAAAGCAAATCTTAACCATTACAAGATCAACCTCCTACAACTGTGCAAAACCATCGTTTGATCTTAATTACCCTTCATTTATAGCTTTCTACAGCAACAGAACAAGTTCAGTTGTCCACAAGTTTAGGAGGACAGTGACCAATGTTGGAGATGGTGCTGCCACATACAGAGCCAAGGTGACACAACCAAAAGGCTCTATGGTGACAGTGTCACCTGAGACGTTAGCATTCAGATATAAAAATGAGAAGCTGAGCTACGATGTTGTGATAAAGTATAGCAAGTACAAGAAGGAAAATATCTCATTTGGGGATCTAGTTTGGATTGAAGATGGTGGAGCACACATTGTTAGAAGCCCCATTGTAGTGGCACCAAGTGGAATTGTATAA 2292 0.4341 MEPKPNFVFPVPFMFLIAHWFLLPLHGSAESSTYIVHMDKSLFPHVFTTHHDWFESTIDSIKSATLGHSSKQSQKMVYSYNHAMYGFSAVLSSEELEAVKNSHGFVAAYPDRNVTIDTTHTFEFLSLDSSSGLWQASNFGEDVIVGVIDTGVWPESESFKDDGMTKKIPNKWKGTCEEGQDFNTSMCNFKLIGARYFNKGVIAANSKVKISMNSARDTSGHGTHTSSTVAGNYVSGASYFGYAKGVARGIAPRARLAMYKVTWKEGRVASDVMAGMDQAIADGVDVISISMGFDGVPLYEDPIAIASFAAMEKGVVVSSSAGNFGPDLGTLHNGIPWLLTVAAGTIDRTFGTLILGNGQTIIGWTLFPANALVENLPLIYNKNTSACNSVKLLSKVATQGIILCDSVSDPELMFNQRLFVNEASLLGAVFISGQPLLKEGHVRSPSIVISAQDAPSVIKYAKSHKKPTATIKFQQTFVGIKPAPAAASYTSRGPSPSYPGVLKPDIMAPGSNVLAAFIPNRGAARIGTNVILPSDYSLLSGTSMACPHASGVAALLKAAHPQWSAAAIRSALVTTASPLDNTQNPIRDFGYPSQYASPLAIGAGQIDPNKALDPGLIYDATPQDYVNLLCALKYTQKQILTITRSTSYNCAKPSFDLNYPSFIAFYSNRTSSVVHKFRRTVTNVGDGAATYRAKVTQPKGSMVTVSPETLAFRYKNEKLSYDVVIKYSKYKKENISFGDLVWIEDGGAHIVRSPIVVAPSGIV 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00189 763 FunFam Subtilisin-like protease SBT1.5 142 355 - -
Pumo5g00189 763 SUPERFAMILY Subtilisin-like 117 616 IPR036852 GO:0004252|GO:0006508
Pumo5g00189 763 Gene3D Peptidase S8/S53 domain 142 625 IPR036852 GO:0004252|GO:0006508
Pumo5g00189 763 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Pumo5g00189 763 CDD Peptidases_S8_3 114 577 IPR034197 -
Pumo5g00189 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Pumo5g00189 763 FunFam Subtilisin-like protease SBT1.9 25 117 - -
Pumo5g00189 763 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Pumo5g00189 763 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Pumo5g00189 763 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Pumo5g00189 763 ProSiteProfiles Serine proteases, subtilase domain profile. 121 612 - -
Pumo5g00189 763 Gene3D - 629 759 - -
Pumo5g00189 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 757 IPR045051 -
Pumo5g00189 763 CDD PA_subtilisin_like 352 471 - -
Pumo5g00189 763 Gene3D - 347 478 - -
Pumo5g00189 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 116 IPR037045 -
Pumo5g00189 763 Pfam Subtilase family 140 588 IPR000209 GO:0006508|GO:0008236
Pumo5g00189 763 Pfam Peptidase inhibitor I9 33 116 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00189 Pumo-Chr5 4829786 4832599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00189 28 760 Subtilisin-like Serine Gene Family AT5G67090 42.914 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00189 - - gmx:100779169 1377.46