Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00184 ATGGCTTCCCACGTTGCTCTTCTTCGTGCCCCTCCTCTTTCAATCTCCACCCAACGCTTCCATGCTAAACAGATTTGCATAAACGGACTCAAATTCACCACCACCACTTCTTCTTCTTCTTCTTGTTTTCCATGTTCCATAACAACACAAAGAGGGTCTTGTTCCTCAGTGATTGCAAGCTCCTCTTCAAATGGCAGAGACCCAAATTCGGTGGATGATGATGAAGTACAACAAGTGGAGCGCATTCTCGAAGAGAAACGACGAGCTGCATTGTCTGCTAAGATTGCCTCAGGGGAATTCACCGTGAAGCAGAAATCTGCTTTACTTTCTATACTGGAGGGCTTGGCAAAGGTGGGGGTGCCCAATGAAGTTCTGGAATTTTTGTTTGGTTGGGTTGAAGGGGGTGGCCTGCACCCCAAAATTCCTGAGGCAAAAGGGTCAATCAAAGCTGTTCGAAGTGTGGCCTTCTTCATTCCCTTGTATGAACTTTACCTCACATATGGTGGGATTTTTAGGTTGACCTTTGGACCGAAGTCCTTTCTAATAGTATCTGATCCCTCTATTGCAAAACACATATTGAGGGACAATTCAAAGGCTTATTCAAAGGGTATCTTGGCTGAGATCCTAGACTTTGTAATGGGGAAAGGGCTCATCCCGGCTGATGGTGAAATATGGCGAGTTAGACGTCGTGCTATAGTCCCAGCATTGCACCAGAAGTATGTAGCAGCTATGATTGGCCTTTTTGGACAAGCTGCAGATAGGCTCTGCCAGAAGCTAGATGCTGCTGCATCTGATGGAGAAGATGTTGAGATGGAATCACTTTTCTCTCGATTGACCTTGGACGTCATTGGCAAGGCAGTATTCAATTATGATTTTGATAGTTTATCAAATGACACTGGTATAGTTGAGGCTGTTTATACTGTACTGAGAGAAGCAGAAGATCGAAGTGTTGCTCCAATTCCAGTCTGGGAGATCCCAATATGGAAAGACGTATCACCACGTCTAAGGAAGGTTAATGCAGCTCTCAAATTGATCAATGATACGCTTGATGATCTGATAGAAATATGCAAGAGAATGGTGGATGAAGAAGAGTTACAGTTTCATGAGGAGTACATGAATGAACAAGATCCAAGTATTCTACACTTCTTGTTGGCGTCCGGAGATGATGTGTCAAGTAAGCAACTTCGTGATGACTTAATGACCATGCTGATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTATCCAAGGAGCCTAGAGTTGTGTCCAAGCTCCAAGAAGAGGTTGACTCTGTAATTGGAGATCGATTTCCAACTATTGAAGACATGAAGAAACTCAAATATACAACCCGAGTGATCAATGAGTCATTGAGGCTTTACCCACAACCACCTGTGTTAATTCGTCGCTCTCTCGAGGATGATGTTCTTGGAGAGTACCCTATAAAGAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGCAGTCCAAAACTGTGGGATGATGCCGACAAGTTTGAACCTGAAAGATGGCCATTAGATGGACCAAATCCTAATGAGACGAATCAAAACTTCAAATATCTTCCGTTTGGTGGCGGACCACGGAAATGTGTAGGTGATTTGTTTGCTTCATACGAGACTGTAGTAGCACTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATAGCAGTTGGAGCTCCACCGGTTGAGATGACTACTGGAGCTACAATTCATACAACACAAGGGTTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTGCCCTCATTACAGATGTCAACTTTGGAAGTGGATCCATCCATAAGCCTTTCAGATCAGGATGAAATAAGTCAGAAAGGCGAAGTTTACCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGGCTCAGTCCTAA 1947 0.4397 MASHVALLRAPPLSISTQRFHAKQICINGLKFTTTTSSSSSCFPCSITTQRGSCSSVIASSSSNGRDPNSVDDDEVQQVERILEEKRRAALSAKIASGEFTVKQKSALLSILEGLAKVGVPNEVLEFLFGWVEGGGLHPKIPEAKGSIKAVRSVAFFIPLYELYLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILDFVMGKGLIPADGEIWRVRRRAIVPALHQKYVAAMIGLFGQAADRLCQKLDAAASDGEDVEMESLFSRLTLDVIGKAVFNYDFDSLSNDTGIVEAVYTVLREAEDRSVAPIPVWEIPIWKDVSPRLRKVNAALKLINDTLDDLIEICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVVSKLQEEVDSVIGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIRRSLEDDVLGEYPIKRGEDIFISVWNLHRSPKLWDDADKFEPERWPLDGPNPNETNQNFKYLPFGGGPRKCVGDLFASYETVVALAMLVRRFNFQIAVGAPPVEMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSISLSDQDEISQKGEVYQAQAQAQAQAQAQAQS 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00184 648 CDD CYP97 158 591 - -
Pumo5g00184 648 FunFam Carotene epsilon-monooxygenase, chloroplastic 142 599 - -
Pumo5g00184 648 PRINTS P450 superfamily signature 535 544 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS P450 superfamily signature 405 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS P450 superfamily signature 544 555 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 SUPERFAMILY Cytochrome P450 155 597 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 Gene3D Cytochrome P450 140 603 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 496 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 394 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 278 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 544 567 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 534 544 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 164 183 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 456 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PRINTS E-class P450 group I signature 414 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 537 546 IPR017972 GO:0005506|GO:0016705
Pumo5g00184 648 Pfam Cytochrome P450 162 580 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00184 648 PANTHER CYTOCHROME P450 FAMILY 4 157 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00184 Pumo-Chr5 4784343 4790633 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00184 65 620 Cytochrome P450 AT1G31800 80.249 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00184 K15747 - gmx:100780770 1187.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00184 5 4784343 4790633 Pumo5g00184 5 4784343 4790633 ECH