Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00158 ATGGAACAAGACAACCACCTTAACAACAACAACAATTGTGACGAGGAAACCTTTGTGTCTGAGTCAAGAGGAACAAAAAGAAGCATTGCTGAGAGAAGGGGTTTCAATTCCAATGCTGCAAGAATCAACACAGCACTGTTTCGCACTGCAACTTCAACAACCCCTTCACCTTCCCCTGCTGCAAGATCACCTCGTCTCACCATTCCACCTGGCATTAGCCCCACTGCTTTGCTTGACTCTCCCATCATGCTTCCAAATTCTCAGGCCATATCTCCAACCACTGGCTCTTTCTTCATGCTGCCACATCTCAGTCATGAAGGATCAATGCTCACAATGGAACAAGGGAATGTGGATGTGTCAACCGCATCTGATGCCGCTGCCTCTTTCAAATTCAAGCCACGTCGACATTTGGATCCTAATCCTTTGCCTCCTTACTCTGCTTCTCTAAATCAGGTTTCTAGTAATTTCCACTCGGTAAAGGGAGGAAATAGAGAGAGCCAACTACTTGCTCAAGTTCAGCCACCATTAGATTTTTCATTCCAAGCAGATTTTTCAAAAGGTCATTCTGTGAAAAATAGTGAAGTGAATTCGTACAATGATATGAAAATGGTAAATGATGCGATTGTTAATGCCAATAATGTTGAGATGCCAATGTCTGGCTCTGAGGAAGTAAGTGATGAAAGCGCTCTGCCGAAAAATGCTATCAATGGTGACGATTTTGGAGGGCAACCTGCTTCAGAAGGAGAACAGAAAGAGGCATCCCATGCAACAGGAGCTGTAAGGACCTCAGAGGATGGTTATAATTGGAGGAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAGGCTAATTGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGACGGTCAAATAACGGAAATTATTTACAAGGGTGCTCATAACCATGCAAAACCACACCCTGGTCATCGAGCATCATCTACACTTTCTACTGATGAGATTTCAGACATGGTTGAAGACAGCAGTACCTTAGCTAAAATTGAGGGTGGTTATGTCTGGAGAAATATTCAGTCAGGATTAAAAGATACAAAACACAGTTTTGATTGGAAGGCCGATGGTCAGGAAAGGACATCATCAACTTCTGTTGTGACTGATCTTTCAGATCCTATATCAATTAACAAAGCTAAATCTCTATGTATGCTTGAATCGGAGGATACTCCAGAGCTTTCTTCTACACTTGCCAGTCATGATGGTGATGAAGATGGAACCACTCAAGCAGTTGTGTCAGCTGAAGACGAAGCTGAGAATGATGAATCAGACTTGAAAAGAAGGAAGAAAGAGAGCTACACAGTTGAACCAAATTTGCCCACTAGGGCTGTTCGTGAGCCAAGAGTTGTTGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGACAAAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCTGGATGTATGGTAAGGAAACATGTGGAAAGGGCTTCACACAATCTGAAATATGTCCTTACTACTTACGAGGGAAAGCATAATCATGAAGTGCCCACTGCTAGAACCAACAATCAGGTCAACTCAAGTGATGGTGGTTTACCTCCCAATGGTGCTAATGGACAAGTGGCTCTTACATTACCGGGGAGTGCCGGCATTCCAAAGCCTGAAACTCATCAAACTCTTGGACATCATTTTGATAGAAAACCTGAATTCAGCAATGAGTTTCTCAGGCCTAGTTTGGTTGGAAGTTTCAGCAATGATATGAAGTTTGGGCCTTCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAATAACACCATGCCTTATGGCTCCTATGGACTGAACCCTGAGCGTTGCTCTGCCCCTCAAGCTGGATCCATTGCCTCAATGTTCCCTGATTTTCCAATGCCGCTGCCATTGAATCTTCCCACATCTGGAAATTTTTCACTTGCTGGACTTAATTTTAACTGTGTAAAACAGATGAATCCTGTCCAGTCTTTCCTTTCGGGGCAGCAGGTGAAGGACATTGATTCAGGGTTCCTGAGGCCTAAACAGGAACAGAAGGATGACAATATATATGGCTCGTGCATGCCCCCACTAGATCATGCAAATGCTTCACTTACTTCTTCTTCAGCATCACCTTCCATTTATCAACGTGTCATGCAAAATTTCCCCTCATAA 2244 0.4318 MEQDNHLNNNNNCDEETFVSESRGTKRSIAERRGFNSNAARINTALFRTATSTTPSPSPAARSPRLTIPPGISPTALLDSPIMLPNSQAISPTTGSFFMLPHLSHEGSMLTMEQGNVDVSTASDAAASFKFKPRRHLDPNPLPPYSASLNQVSSNFHSVKGGNRESQLLAQVQPPLDFSFQADFSKGHSVKNSEVNSYNDMKMVNDAIVNANNVEMPMSGSEEVSDESALPKNAINGDDFGGQPASEGEQKEASHATGAVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQANCQVKKKVERSHDGQITEIIYKGAHNHAKPHPGHRASSTLSTDEISDMVEDSSTLAKIEGGYVWRNIQSGLKDTKHSFDWKADGQERTSSTSVVTDLSDPISINKAKSLCMLESEDTPELSSTLASHDGDEDGTTQAVVSAEDEAENDESDLKRRKKESYTVEPNLPTRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKYVLTTYEGKHNHEVPTARTNNQVNSSDGGLPPNGANGQVALTLPGSAGIPKPETHQTLGHHFDRKPEFSNEFLRPSLVGSFSNDMKFGPSSLCQMKYPSLNNTMPYGSYGLNPERCSAPQAGSIASMFPDFPMPLPLNLPTSGNFSLAGLNFNCVKQMNPVQSFLSGQQVKDIDSGFLRPKQEQKDDNIYGSCMPPLDHANASLTSSSASPSIYQRVMQNFPS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00158 747 Gene3D WRKY domain 249 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 ProSiteProfiles WRKY domain profile. 474 539 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 MobiDBLite consensus disorder prediction 439 453 - -
Pumo5g00158 747 MobiDBLite consensus disorder prediction 406 453 - -
Pumo5g00158 747 FunFam WRKY transcription factor 57 465 539 - -
Pumo5g00158 747 ProSiteProfiles WRKY domain profile. 258 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 Coils Coil 430 450 - -
Pumo5g00158 747 MobiDBLite consensus disorder prediction 218 262 - -
Pumo5g00158 747 MobiDBLite consensus disorder prediction 48 73 - -
Pumo5g00158 747 MobiDBLite consensus disorder prediction 407 422 - -
Pumo5g00158 747 Gene3D WRKY domain 466 532 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 SUPERFAMILY WRKY DNA-binding domain 260 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 Pfam WRKY DNA -binding domain 480 537 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 Pfam WRKY DNA -binding domain 264 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 SMART WRKY_cls 479 538 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 SMART WRKY_cls 263 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 MobiDBLite consensus disorder prediction 1 18 - -
Pumo5g00158 747 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 177 557 IPR044810 GO:0003700
Pumo5g00158 747 SUPERFAMILY WRKY DNA-binding domain 472 539 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pumo5g00158 747 FunFam WRKY transcription factor 250 323 - -
Pumo5g00158 747 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00158 Pumo-Chr5 4508466 4512588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00158 1 542 WRKY Transcription Factor Family AT5G56270 41.021 4.74e-100 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pumo5g00158 WRKY 7.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00158 K18835 - gmx:100800211 1308.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00158 5 4508466 4512588 Pumo5g00158 5 4508466 4512588 ECH