Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g00158 | ATGGAACAAGACAACCACCTTAACAACAACAACAATTGTGACGAGGAAACCTTTGTGTCTGAGTCAAGAGGAACAAAAAGAAGCATTGCTGAGAGAAGGGGTTTCAATTCCAATGCTGCAAGAATCAACACAGCACTGTTTCGCACTGCAACTTCAACAACCCCTTCACCTTCCCCTGCTGCAAGATCACCTCGTCTCACCATTCCACCTGGCATTAGCCCCACTGCTTTGCTTGACTCTCCCATCATGCTTCCAAATTCTCAGGCCATATCTCCAACCACTGGCTCTTTCTTCATGCTGCCACATCTCAGTCATGAAGGATCAATGCTCACAATGGAACAAGGGAATGTGGATGTGTCAACCGCATCTGATGCCGCTGCCTCTTTCAAATTCAAGCCACGTCGACATTTGGATCCTAATCCTTTGCCTCCTTACTCTGCTTCTCTAAATCAGGTTTCTAGTAATTTCCACTCGGTAAAGGGAGGAAATAGAGAGAGCCAACTACTTGCTCAAGTTCAGCCACCATTAGATTTTTCATTCCAAGCAGATTTTTCAAAAGGTCATTCTGTGAAAAATAGTGAAGTGAATTCGTACAATGATATGAAAATGGTAAATGATGCGATTGTTAATGCCAATAATGTTGAGATGCCAATGTCTGGCTCTGAGGAAGTAAGTGATGAAAGCGCTCTGCCGAAAAATGCTATCAATGGTGACGATTTTGGAGGGCAACCTGCTTCAGAAGGAGAACAGAAAGAGGCATCCCATGCAACAGGAGCTGTAAGGACCTCAGAGGATGGTTATAATTGGAGGAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAGGCTAATTGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGACGGTCAAATAACGGAAATTATTTACAAGGGTGCTCATAACCATGCAAAACCACACCCTGGTCATCGAGCATCATCTACACTTTCTACTGATGAGATTTCAGACATGGTTGAAGACAGCAGTACCTTAGCTAAAATTGAGGGTGGTTATGTCTGGAGAAATATTCAGTCAGGATTAAAAGATACAAAACACAGTTTTGATTGGAAGGCCGATGGTCAGGAAAGGACATCATCAACTTCTGTTGTGACTGATCTTTCAGATCCTATATCAATTAACAAAGCTAAATCTCTATGTATGCTTGAATCGGAGGATACTCCAGAGCTTTCTTCTACACTTGCCAGTCATGATGGTGATGAAGATGGAACCACTCAAGCAGTTGTGTCAGCTGAAGACGAAGCTGAGAATGATGAATCAGACTTGAAAAGAAGGAAGAAAGAGAGCTACACAGTTGAACCAAATTTGCCCACTAGGGCTGTTCGTGAGCCAAGAGTTGTTGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGTTATCGCTGGCGTAAGTATGGACAAAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCTGGATGTATGGTAAGGAAACATGTGGAAAGGGCTTCACACAATCTGAAATATGTCCTTACTACTTACGAGGGAAAGCATAATCATGAAGTGCCCACTGCTAGAACCAACAATCAGGTCAACTCAAGTGATGGTGGTTTACCTCCCAATGGTGCTAATGGACAAGTGGCTCTTACATTACCGGGGAGTGCCGGCATTCCAAAGCCTGAAACTCATCAAACTCTTGGACATCATTTTGATAGAAAACCTGAATTCAGCAATGAGTTTCTCAGGCCTAGTTTGGTTGGAAGTTTCAGCAATGATATGAAGTTTGGGCCTTCTTCCCTTTGCCAAATGAAGTATCCTTCCTTGAATAACACCATGCCTTATGGCTCCTATGGACTGAACCCTGAGCGTTGCTCTGCCCCTCAAGCTGGATCCATTGCCTCAATGTTCCCTGATTTTCCAATGCCGCTGCCATTGAATCTTCCCACATCTGGAAATTTTTCACTTGCTGGACTTAATTTTAACTGTGTAAAACAGATGAATCCTGTCCAGTCTTTCCTTTCGGGGCAGCAGGTGAAGGACATTGATTCAGGGTTCCTGAGGCCTAAACAGGAACAGAAGGATGACAATATATATGGCTCGTGCATGCCCCCACTAGATCATGCAAATGCTTCACTTACTTCTTCTTCAGCATCACCTTCCATTTATCAACGTGTCATGCAAAATTTCCCCTCATAA | 2244 | 0.4318 | MEQDNHLNNNNNCDEETFVSESRGTKRSIAERRGFNSNAARINTALFRTATSTTPSPSPAARSPRLTIPPGISPTALLDSPIMLPNSQAISPTTGSFFMLPHLSHEGSMLTMEQGNVDVSTASDAAASFKFKPRRHLDPNPLPPYSASLNQVSSNFHSVKGGNRESQLLAQVQPPLDFSFQADFSKGHSVKNSEVNSYNDMKMVNDAIVNANNVEMPMSGSEEVSDESALPKNAINGDDFGGQPASEGEQKEASHATGAVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQANCQVKKKVERSHDGQITEIIYKGAHNHAKPHPGHRASSTLSTDEISDMVEDSSTLAKIEGGYVWRNIQSGLKDTKHSFDWKADGQERTSSTSVVTDLSDPISINKAKSLCMLESEDTPELSSTLASHDGDEDGTTQAVVSAEDEAENDESDLKRRKKESYTVEPNLPTRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASHNLKYVLTTYEGKHNHEVPTARTNNQVNSSDGGLPPNGANGQVALTLPGSAGIPKPETHQTLGHHFDRKPEFSNEFLRPSLVGSFSNDMKFGPSSLCQMKYPSLNNTMPYGSYGLNPERCSAPQAGSIASMFPDFPMPLPLNLPTSGNFSLAGLNFNCVKQMNPVQSFLSGQQVKDIDSGFLRPKQEQKDDNIYGSCMPPLDHANASLTSSSASPSIYQRVMQNFPS | 747 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g00158 | 747 | Gene3D | WRKY domain | 249 | 323 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | ProSiteProfiles | WRKY domain profile. | 474 | 539 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | MobiDBLite | consensus disorder prediction | 439 | 453 | - | - | |
Pumo5g00158 | 747 | MobiDBLite | consensus disorder prediction | 406 | 453 | - | - | |
Pumo5g00158 | 747 | FunFam | WRKY transcription factor 57 | 465 | 539 | - | - | |
Pumo5g00158 | 747 | ProSiteProfiles | WRKY domain profile. | 258 | 322 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | Coils | Coil | 430 | 450 | - | - | |
Pumo5g00158 | 747 | MobiDBLite | consensus disorder prediction | 218 | 262 | - | - | |
Pumo5g00158 | 747 | MobiDBLite | consensus disorder prediction | 48 | 73 | - | - | |
Pumo5g00158 | 747 | MobiDBLite | consensus disorder prediction | 407 | 422 | - | - | |
Pumo5g00158 | 747 | Gene3D | WRKY domain | 466 | 532 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | SUPERFAMILY | WRKY DNA-binding domain | 260 | 322 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | Pfam | WRKY DNA -binding domain | 480 | 537 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | Pfam | WRKY DNA -binding domain | 264 | 319 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | SMART | WRKY_cls | 479 | 538 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | SMART | WRKY_cls | 263 | 321 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Pumo5g00158 | 747 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 177 | 557 | IPR044810 | GO:0003700 | |
Pumo5g00158 | 747 | SUPERFAMILY | WRKY DNA-binding domain | 472 | 539 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pumo5g00158 | 747 | FunFam | WRKY transcription factor | 250 | 323 | - | - | |
Pumo5g00158 | 747 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g00158 | Pumo-Chr5 | 4508466 | 4512588 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g00158 | 1 | 542 | WRKY Transcription Factor Family | AT5G56270 | 41.021 | 4.74e-100 | 322 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pumo5g00158 | WRKY | 7.9e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g00158 | K18835 | - | gmx:100800211 | 1308.12 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo5g00158 | 5 | 4508466 | 4512588 | Pumo5g00158 | 5 | 4508466 | 4512588 | ECH |