Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00138 ATGCAAGAATGCATTTGGAGCTTAATCACCACGGAGGATGGTCAATTTGTCTACAATCTCCTTATGGAGTTTGCCCCTTGCAGTTCTCTTGGAGTCTTAATCAAAAGGAAACCATTCTACGCACGCATGCTTCTCAAAGTACTTTCTATCATTCATCAATTTGGGGTTGTTCATTGTGATCTAAAACCAGACAACATCGTTCTCTTGTCTTTATGTGAGGATGGTGTAGAGTATCAAGTCAACATTGCAGATTTTGGATTGTCCAAGACCAAAGGTGAGGAATTTGATGCTGACTTTTGGAAGATCAAGTTAAGATCGAGCATCAAATTCCTCGCCTTTGGTCTTGGACAATCCAAAATATGCAATCTTGAGTTGATACTCAACACCATCCTCACGAAGAGAATGATGTTGTCTGCTTTAGATCACAATGAGCAGCCCCAAATTGATAAATGA 453 0.3996 MQECIWSLITTEDGQFVYNLLMEFAPCSSLGVLIKRKPFYARMLLKVLSIIHQFGVVHCDLKPDNIVLLSLCEDGVEYQVNIADFGLSKTKGEEFDADFWKIKLRSSIKFLAFGLGQSKICNLELILNTILTKRMMLSALDHNEQPQIDK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00138 150 SUPERFAMILY Protein kinase-like (PK-like) 16 93 IPR011009 -
Pumo5g00138 150 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00138 150 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 12 94 - -
Pumo5g00138 150 Pfam Protein kinase domain 18 90 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00138 150 Gene3D Transferase(Phosphotransferase) domain 1 3 135 - -
Pumo5g00138 150 ProSitePatterns Serine/Threonine protein kinases active-site signature. 56 68 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00138 Pumo-Chr5 4308783 4309677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00138 13 89 MAP Kinase Kinase Kinase AT2G32510 40.698 3.85e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo5g00138 Pkinase 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00138 - - gmx:102667952 151.369