Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00112 ATGCAAACCTTCTACTTGTCCCTTTTCCTTCTCTTCTTGTCATGTGCTCTTCAACAACTAGCTCTAGTCTCATCACAACCCTTGTTCTTCATCAACACCAACAGAAGGATCCTCCATGAACCATTTGTTCCTTTAGCCACTCTTTCTCCATCTGAACCACCAAAACCACAACCTCCTCATCCTTCCCCTTCAACCCAAAAACAAAAACCCAAACCCAAATATCCATCATCATCCACCATTCCCACCACCACTGATACTACACCAACAACACCAACAACTACAACACAATCACCATTTTTCCCATTATACCCCTCTTCTCCTCCACCTCCTTCTCCAATCACCTTTGCCTCCTTTCCTGCCAACATTTCCTCTCTCATTCTCCCTCACTCTCCCAAACCCAATTCCTCCTCCAACAAACTCCTCCCTGTTGCTCTCTCCGCCGTCTCCGCCGCCGTACTCGCCGTCATCATCTCCGCCTTTGTCTGTTACCGCCGCCGCCGGAACTCTCTCCCCTCCGCCGAAGGCAAACTTCTCCGATCCGACACCATCCTCCGGCCTCTCCGTCACAATGCTGAAACCGCCGTCGAAACACGAAAGCTCCGGCACACGTCCTCCACCAGCTCCGAGTTTCTCTACCTCGGCACCGTCGTCAACTCGCACGTAATTGAAGATGCCGCCGACGTCTCTGACGTCGGCAGCGACCGGAAAATGGAGTCGCCGGAGCTCCGGCCGCTGCCACCGCTAGCACGACAAGCTTCCTTGCCGCCGCCTCCTCCGCCGTGCGAGGAGGCGGGGTTCACCACCGCGGAGGAGGAGGAGGATGAGGAGTTTTACTCGCCGAGAGGCTCGTCGTTGGGAGGCTCCGGCGGAACCGGATCGGGTTCCCGGCGAATTTTCGCCCCCTGGAAGAAGCGTCATCTCTATTCCCGGAAAACACAGCCGAAGTCACCGGAAAATTACAACCACCAACACGTGCAATCTTCTTCTTCGACTTCGTTGTGCTCAACACCAGATAGGGTTTTCACTGAACATAATTCAAACGAAGCATTAAGTGCATGTGCACATGCACATGCATCATCATCATTACATGAAGCAACATTGGAGAAAAATGAAAATGCATTATCATCTTCACCACCACCACCGCCACCGAGACTATCTAATGCTTCTTCGTCTTCGGCCTTTTCTCTTCCCTCGTCGCCGGAGAAGGTTCTTATGGTGTGCCTGCGCCGCAGAGGAAACACTGGAACATTCCGGCGCTTGTCACTAACACCACCCTTTGATGAAGTTGGAATGGTTCCGGCTCCTCCACCTTTGCCACAGAGGAAGCATTGGGAGATTCCAGGCACTGCTCCACCACCGCCACCACCATTGCCACGGCAAAGGAAGCAGTGGGGAGAGCCAGCGCCTGCACCGGGGCCGTTGGCACCGGTTGGTCAACCGGTGTCGAGGCCACCGGAATTGGTGCCTCCTTCGAGGCCTTTTGTGTTGCAAAACCAAGCAACCAATGTTGAGTTGCCGGCGAGTTCGGGGGAAATTGAAGAGACTAGTAAACCAAAGTTGAAGCCCCTGCATTGGGACAAAGTGAGAACGACCTCTGATCGTGAAATGGTGTGGGATCAGATGAAATCCAGCTCGTTTAAATTGAATGAGAAAATGATTGAGACATTGTTTGTAGTGAACACACCAAACCCAAATGCAACTACAAGCTCAGTGTTTCACCAGCCTAATCAGGAGGAAAGAGTACTCGATCCCAAAAAGTCTCAGAATATTTCAATCTTGCTGAAAGCACTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTCTTAGAAGGTAGTACTGATACACTTGGAACAGAATTACTTGAAAGCTTATTAAGAATGGCACCAAGCAAGGAAGAAGAACGTAAGTTGAAGGAACATAAAGATGATTCACCAACCAAGCTTGGTCTGGCTGAAAATTTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGGATTGAAGCAATGCTTTACATAGCCAATTTTGAGTCTGAAGTGGAGTATCTTAGGACATCCTTTCAAACTCTAGAGGCTGCCTGTGAAGAGCTGCGACATTCTAGAATGTTCTTGAAGCTTCTGGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACCAACCGCGGGGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAGCTGGCCGATGTCAAAGGCGCAGATGGGAAAACCACTCTACTGCATTTTGTTGTACAGGAAATTATCCGAACCGAAGGTGCTCGTCTCTCCAGCACTAATCAAACTCCAAGCCCTATTTTGAGTGAAGATGCCAAGTGTAGGAGGCTTGGACTACAAGTTGTATCAAGCCTGAGTTCTGAGCTAGCAAATGTGAAGAAGGCTGCTGCTATGGATTCTGAAGTTCTCAGCAGTGATGTCTTAAAACTTTCAAAAGGAATTGCAAAGATAGCAGAGGTTGTGCAATTAAACCAAACAATGGCATCAGATGAAAGCAATCAGAAATTTACAGAATCAATGAACAAGTTCATCATAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCACAAGAAAGTGTTGCTTCATCCCTTGTGAAGGAGATTACAGAGTATTTTCTTGGGAACTTGGCAAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTTGTAAGAGACTTCCTGGCAGTTCTTGACCGGGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACCATGGTTAGTTCAGCCCATAAATTCCCTGTGCCAGTTAACCCTATGCTTCCACAACCCCTTCCTGGATTACATGAGAGGCAACAGTATAATAGCTCTTCAGATGATGACAGTGCATCACCTTAG 2883 0.4835 MQTFYLSLFLLFLSCALQQLALVSSQPLFFINTNRRILHEPFVPLATLSPSEPPKPQPPHPSPSTQKQKPKPKYPSSSTIPTTTDTTPTTPTTTTQSPFFPLYPSSPPPPSPITFASFPANISSLILPHSPKPNSSSNKLLPVALSAVSAAVLAVIISAFVCYRRRRNSLPSAEGKLLRSDTILRPLRHNAETAVETRKLRHTSSTSSEFLYLGTVVNSHVIEDAADVSDVGSDRKMESPELRPLPPLARQASLPPPPPPCEEAGFTTAEEEEDEEFYSPRGSSLGGSGGTGSGSRRIFAPWKKRHLYSRKTQPKSPENYNHQHVQSSSSTSLCSTPDRVFTEHNSNEALSACAHAHASSSLHEATLEKNENALSSSPPPPPPRLSNASSSSAFSLPSSPEKVLMVCLRRRGNTGTFRRLSLTPPFDEVGMVPAPPPLPQRKHWEIPGTAPPPPPPLPRQRKQWGEPAPAPGPLAPVGQPVSRPPELVPPSRPFVLQNQATNVELPASSGEIEETSKPKLKPLHWDKVRTTSDREMVWDQMKSSSFKLNEKMIETLFVVNTPNPNATTSSVFHQPNQEERVLDPKKSQNISILLKALNVTIEEVCEALLEGSTDTLGTELLESLLRMAPSKEEERKLKEHKDDSPTKLGLAENFLKAVLDVPFAFKRIEAMLYIANFESEVEYLRTSFQTLEAACEELRHSRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSSTNQTPSPILSEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSDVLKLSKGIAKIAEVVQLNQTMASDESNQKFTESMNKFIIMAEEEIPKIQAQESVASSLVKEITEYFLGNLAKEEAHPFRIFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHERQQYNSSSDDDSASP 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00112 960 MobiDBLite consensus disorder prediction 69 100 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 354 399 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 229 299 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 47 103 - -
Pumo5g00112 960 Pfam Formin Homology 2 Domain 514 906 IPR015425 -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 311 339 - -
Pumo5g00112 960 ProSiteProfiles Formin homology-2 (FH2) domain profile. 510 932 IPR015425 -
Pumo5g00112 960 SMART it6_source 510 921 IPR015425 -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 249 263 - -
Pumo5g00112 960 Gene3D Formin, FH2 domain 510 915 IPR042201 -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 944 960 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 47 68 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 313 339 - -
Pumo5g00112 960 PANTHER FORMIN-RELATED 9 954 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo5g00112 960 SUPERFAMILY Formin homology 2 domain (FH2 domain) 523 918 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 936 960 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 429 462 - -
Pumo5g00112 960 MobiDBLite consensus disorder prediction 417 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00112 Pumo-Chr5 3934440 3939549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00112 481 948 FH2 protein (formin) Gene Family AT3G25500 73.389 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00112 - - gmx:100806759 1184.09