Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00103 ATGAAAGTGCTGAACTTAACCAAATTGTTGACTCAAGTCACTAATGATATTGTGTGTAGGTGTGTTATTGGAAGGAGATGTGATGAGAGTGAGGTTAGGGAGCCAATAAGCCAGATGGAAGAGCTGTTGGGGGCTTCAGTTTTGGGAGACTATATACCTTGGCTTGATTGGTTGGGAAGAGTTAATGGGGTGTATGGTAGAGCAGAGAGAGTGGCTAAAAAGCTTGGTCAATTTTATGATAAAATTGTTGAAGAGCATGTTAGTAAGAGAGGCCCTGATAAGCATGGGAATGATTTTGTGGACATTTTGCTGTCCATTCAAGCCACAGATTTCCAGTTTGATAGAACATTCGTCAAGAGTTTGATCATGGATATGTTAGCTGCAGGAACTGATACTATCCTTGCAATCATAGAGTGGGCTATGACAGAACTCTTGAGGCACCCAAATGTGATGCAAAAACTACAAGATGGGGTGAGAAGCGTGGTGGCCAGGGACAAGACTCACATAACCGAAGAGGATTTGAATGGCATGCCTTACCTAAAAGCAGTTATCAAAGAAACTCTTAGATTACATCCTGCAACTCCAATATTGATTCCAAGGGAATCCATGCAAGACACCAAAGTGATGGTTGACCCTTCATACTGGGATCAGCCCCTAGAGTTTCAACCAGAGAGACACTTGAAGAGTTCAATAGATATCAAAGGACATGATTTTCAATTGATATCATTTGGAGCTGGAAGGAGGGGGTGTCCAGGAATAGCATTTGCCATGGTTGTGAATGAGTTGGTCCTTGCAAACATTGTGCACCAATTTGATTGGGCAGTGCCTGGTGGAGTGGTGGGGGAGCAGGCATTGGATTTGTCTGAAACTAATGGATTGTCTGTTCACAAAAAATTACCTCTTATGGCACTTGCATCACTTCATCATGTGTAA 933 0.4255 MKVLNLTKLLTQVTNDIVCRCVIGRRCDESEVREPISQMEELLGASVLGDYIPWLDWLGRVNGVYGRAERVAKKLGQFYDKIVEEHVSKRGPDKHGNDFVDILLSIQATDFQFDRTFVKSLIMDMLAAGTDTILAIIEWAMTELLRHPNVMQKLQDGVRSVVARDKTHITEEDLNGMPYLKAVIKETLRLHPATPILIPRESMQDTKVMVDPSYWDQPLEFQPERHLKSSIDIKGHDFQLISFGAGRRGCPGIAFAMVVNELVLANIVHQFDWAVPGGVVGEQALDLSETNGLSVHKKLPLMALASLHHV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00103 310 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 243 252 IPR017972 GO:0005506|GO:0016705
Pumo5g00103 310 Gene3D Cytochrome P450 1 304 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS E-class P450 group I signature 250 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS E-class P450 group I signature 13 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS E-class P450 group I signature 117 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS E-class P450 group I signature 240 250 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS E-class P450 group I signature 137 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS E-class P450 group I signature 204 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PANTHER CYTOCHROME P450 71B11-RELATED 3 305 - -
Pumo5g00103 310 SUPERFAMILY Cytochrome P450 3 303 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 Pfam Cytochrome P450 209 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 Pfam Cytochrome P450 3 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS P450 superfamily signature 128 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS P450 superfamily signature 241 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g00103 310 PRINTS P450 superfamily signature 182 193 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00103 Pumo-Chr5 3809577 3811613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00103 4 306 Cytochrome P450 AT3G48270 40.184 3.72e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00103 - - gmx:100786425 543.888