Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00081 ATGCTCCTCCGTTACTCTCTGCACCTCCCAATTACATCTTCTTACTCACACACCTCTAACCGCAGCCCCAACACGAACGGTTACATAAAGTTCCGAACAAGGTACCGCGAAAACCTGCAATATCTCCGAGCCTTAACCATTATCGACCCGAAAACCAAACCCGAGGACCTCCCTCTCCCCAACGACGTGGACCACATCATCGACACCCTCACATTCCTTAAGTCCCACTCCTTCTCCGACACCGACATCCCCCGACTCAAGTTCCTCACTCCTCAGCTCTTCACCACCGCCGTCGTGCCCTCCGACGTCGCCCCCGTGTTCCGCTTCCTCGCCGACGACCTCGCCGCCACCAAATCCGAGTCCCGCGACCTCATCCTCCGCTGCCCCAAACTCCTCTTCTCCCACGTCGACCTCTGCCTCCGACCCACGCTCCAATTTCTCCGGCAGGTTGGGGTCCAGGGGCTGAACCGGGCCACGGCCCGGAACGCGCACCTGCTGAACACGCGCGTGGAGAAGCTGCACGCGAAGGTTCAGTTCCTGCAGGAGTTGGGGTTTTCGTACGAGGAGGCACTGAGGGCATGTGCGAGGTTGCCCGCGATTTTCGGGTATGACGTGGAGAACAATCTGTGGCCCAAGTTTGTGTATCTTATGAAGGAAATGCAGAGAGATTTGGAGGAGTTGAAGAGATTTCCTCAGTACTTTGGGTTCAGTTTGAAGGAGAGGATTGTGCCAAGGCACTTGCATTTGAAGCAGAGGGGTGTCAGGATTCCCTTGAACAGAATGTTGATGTGGGGTGATGACAAGTTCTACGCCAAGTGGAAGTGA 825 0.56 MLLRYSLHLPITSSYSHTSNRSPNTNGYIKFRTRYRENLQYLRALTIIDPKTKPEDLPLPNDVDHIIDTLTFLKSHSFSDTDIPRLKFLTPQLFTTAVVPSDVAPVFRFLADDLAATKSESRDLILRCPKLLFSHVDLCLRPTLQFLRQVGVQGLNRATARNAHLLNTRVEKLHAKVQFLQELGFSYEEALRACARLPAIFGYDVENNLWPKFVYLMKEMQRDLEELKRFPQYFGFSLKERIVPRHLHLKQRGVRIPLNRMLMWGDDKFYAKWK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00081 274 PANTHER CGI-12 PROTEIN-RELATED 171 272 IPR003690 GO:0003690|GO:0006355
Pumo5g00081 274 SMART mt_12 191 223 IPR003690 GO:0003690|GO:0006355
Pumo5g00081 274 SMART mt_12 156 186 IPR003690 GO:0003690|GO:0006355
Pumo5g00081 274 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Pumo5g00081 274 SMART mt_12 224 255 IPR003690 GO:0003690|GO:0006355
Pumo5g00081 274 FunFam Transcription termination factor MTEF1, chloroplastic 33 274 - -
Pumo5g00081 274 Pfam mTERF 123 269 IPR003690 GO:0003690|GO:0006355
Pumo5g00081 274 Gene3D Transcription termination factor 3, mitochondrial 56 274 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo5g00081 mTERF 1.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00081 K15032 - gmx:100812333 526.554