Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00076 ATGTCTTCAAAAGCAAAAGCTGTTTGTCAGACACATTTCCCAAGACCAAATGAGAAGTGTTACATTGTATACTTGGGAGCTCATTCTCATGGTCCCAGCCCTACGTCTCTTGACCTCGAAATTGCTACGCATTCTCATTATGATTTCTTAGGTTCAATCTTGGGAAGTCGGGAGAAAGCGAAAGAAGCAATTATTTACTCATATAATAAACACATCAATGGCTTTGCTGCACTACTTGAGGAGGAAGAAGCAGCAGACATTGCAAAAAACCCAAATGTGGTGTCTGTGTTCTTGACCAAAAAACATAAATTGCACACTACCCGTTCATGGGAATTTCTTGGACTGCACAGAAATAGTAAGAACTCAGCATGGCAAAAGGGAAGATTTGGCGAAAATACAATAATTGGCAACATCGACACAGGTGTTTGGCCTGAATCCCAGAGCTTCAGTGATAAAGGATTTGGCCCTGTCCCATCAAAATGGCGCGGGGGTAACGGAGCCAGTCTATTTGTAAAATTGCCACCCAATCAGGCGTTTTCTCTGATCCTCTCCACTGATGCTAAACTTGCTAATGCAACATTTCGAGATGCTCAACTTTGTAGGCCTGGAACACTTGACCCTACAAAAGTAAATGGCAAAATAGTGTCATGTTTTCGAGAAGGAAAAATAAAATCAGTTGCCGAGGGTAATGAAGCTCTATCTGCAGGCGCCCAGGGAATGGTTTTGGCCAATCAAATGCAAAATGGGAAAACACTTGGTGCTGAGCCTCATGTTTTGTCCACTGTGAACACGTATCCACCTCATCCAGGGCCACATAAACCCTCAGTTGAAGGACATTTTGACATAACTGCCACGGACTACTCTTTAAAATCTGGAGCTACAGTAAAATTGTCCCCAGCAAGAACGTTATTTGGAAGAAAGCCAGCGCCAGTTATGGCTTCATACTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAGCCTGATGTGACTGCGCCTGGTGTGAACATACTTGCTGCCTATTCAGAATTCGCAAGTGCATCCAACTTGCTAACGGACAGTCGTCGTGGGTTTAAATTCAATGTATTGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCGGGCATCGCTGGGCTTCTCAAAACACGTCATCCTGATTGGAGTCCTGCTGCTATTAAATCAGCAATTATGACCACAGTTCTAGAAATTTCTCAGTGA 1224 0.4346 MSSKAKAVCQTHFPRPNEKCYIVYLGAHSHGPSPTSLDLEIATHSHYDFLGSILGSREKAKEAIIYSYNKHINGFAALLEEEEAADIAKNPNVVSVFLTKKHKLHTTRSWEFLGLHRNSKNSAWQKGRFGENTIIGNIDTGVWPESQSFSDKGFGPVPSKWRGGNGASLFVKLPPNQAFSLILSTDAKLANATFRDAQLCRPGTLDPTKVNGKIVSCFREGKIKSVAEGNEALSAGAQGMVLANQMQNGKTLGAEPHVLSTVNTYPPHPGPHKPSVEGHFDITATDYSLKSGATVKLSPARTLFGRKPAPVMASYSSRGPNKIQPSILKPDVTAPGVNILAAYSEFASASNLLTDSRRGFKFNVLQGTSMSCPHVAGIAGLLKTRHPDWSPAAIKSAIMTTVLEISQ 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00076 407 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 179 403 IPR045051 -
Pumo5g00076 407 Gene3D Peptidase S8/S53 domain 133 163 IPR036852 GO:0004252|GO:0006508
Pumo5g00076 407 Gene3D Peptidase S8/S53 domain 305 402 IPR036852 GO:0004252|GO:0006508
Pumo5g00076 407 Gene3D - 174 304 - -
Pumo5g00076 407 Pfam Peptidase inhibitor I9 21 104 IPR010259 -
Pumo5g00076 407 ProSiteProfiles Serine proteases, subtilase domain profile. 109 407 - -
Pumo5g00076 407 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 4 105 IPR037045 -
Pumo5g00076 407 Pfam Subtilase family 309 402 IPR000209 GO:0006508|GO:0008236
Pumo5g00076 407 SUPERFAMILY Subtilisin-like 37 401 IPR036852 GO:0004252|GO:0006508
Pumo5g00076 407 FunFam Subtilisin-like protease SBT5.3 11 105 - -
Pumo5g00076 407 ProSitePatterns Serine proteases, subtilase family, serine active site. 367 377 IPR023828 -
Pumo5g00076 407 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Pumo5g00076 407 PRINTS Subtilisin serine protease family (S8) signature 366 382 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00076 Pumo-Chr5 3236317 3247461 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00076 173 401 Subtilisin-like Serine Gene Family AT2G04160 48.035 2.17e-55 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00076 - - gmx:100815159 369.007