LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g00074	ATGGATACTCCTAAAATTATGCCATACACGTACCGGTATCCTGCACTTCTTGGGTGGTTGGCATGTCTCTCAAAAGACCAAATGAGAAGAGCGAAGAGTGAGATGTTAGGGTATGTTTGGGTTAAAAAAGTAAATGAAAAGGAAACAAGGGAGAGAAAAAGAATAGAAAGTGAGTGTTACATTATATACTTGGGAGCTCATTCTCATGGTCCCAGCCCTACATCTGTTGATCTCGAAATTGCTACGTATTCTCATTATGATCTACTAGGTTCAATCTTGGGAAGTCAAGAAAAAGCAAAAGAAACAATTATTTACTCGTATAATAGACACATCAATGGCTTTGCTGCGCTACTTGAGGAGGAAGAAGCAGCAGATATTGCAAAAAACCCAAATGTAGTGTCTGTGTTCTTGAGCAAAGAACATAAATTGCACACAACCCGGTCATGGGAATTTCTTGGACTACACAGAAATGGTAGGAACTCTGCATGGCAAAAGGGAAGATTTGGCGAAAATACAATAATCGGTAACATCGACACAGGTATTTGGCCTGAATCCCAGAGCTTCAATGATAAAGGATTTGGTCCCATCCCATCAAAATGGCGCGGGGGTAACGTTTGTCAAATTAACAGACTCCGGGGCTCCAAGAGAAATCCATGCAACAGGAAGCTGATTGGAGCAAGATTCTTTAGCAAAGCTTTCGAGGCATATAATGGCCAACTTAGACCATCGCAATACACAGCACGTGACTTTGTGGGGCATGGTACCCATACTCTATCAACCGCTGGGGGCAATTTTGTCCCAGGCGCGAGTGTATTTGCTGTTGGCAATGGCACTGCAAAGGGTGGGTCCCCCAAAGCTCGAGTTGCAGCTTACAAAGTGTGCTGGTCTCTAACTGATCCTGTCAGTTGTTTTGGTGCGGATGTGTTGGCTGCTATTGACCAAGCCATAGACGATGGTGTTGATGTCATCAATCTTTCTATTGGTGGCTTTCACGTTGTCACTCCTGAAGGAATATTCACAGATGAGGTTTCCATTGGGGCATTCCATGCAATTGCTAGAAACATACTTTTAGTTGCTTCAGCAGGGAATGATGGACCAACGCCTAGATCTGTTGTCAATGTGGCTCCTTGGGTCTTCACAATTGCTGCTAGCACAATAGATAGGGATTTTAGCAGTACTTTAACCATTGTTGGCAACAATCAACAAATCATGGGAGCCAGTCTTTTTGTAGATTTGCCTCCCAATCAGGCCTTTTCTCTGATCCTCTCCACTGATGCTAAACTTTCTAATGCGACATTTCGAGACACTCAACTTTGTAGGCCTGGAACACTTGATCCTACAAAAGTAAATGGGAAAATAGTGTCATGCATTCGTGAAGGAAAGATAAAATCAGTTGCTGAGGGTCAGGAAGCTCTATCTGCGGGAGCAAAGGGAATGATTTTGGCCAATCAAAAGCAAAATGGGAATACACTTCTTGCTGAGCCTCATGTTTTGCCCGTTTTGAGCTATCCTGACGAACATAAAGATACAAAGCCCGCTTCTACAATAAAAATGTCCCCAGCAAGAACATTATTTGAAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGAGGACCCAATCCAATTCAGCCATCAATACTCAAGCCTGATGTGACTGCGCCTGGTGTGAACATACTTGCTGCCTATTCAGAATTCGCAAGTGCATCTAACTTGCTAACAGACAGTCGTCGTGGGTTTAAATTCAATGTATTGCAAGGAACTTCTATGTCTTGCCCTCATGTTGCTGGCATTGCTGGACTTCTCAAAACACTTCATCCTGATTGGAGTCCAGCAGCTATTAAATCAGCAATCATGACCACAGCAACCACACGTGACAACACAAACAAGCCAATACAGGATGCGTTTGATAAAACACTGGCAACTCCCTTTGCTTATGGTTCAGGGCAAGTTCAACCCAACCTCGCGATAGATCCTGGGCTTGTTTATGATCTAAGCCTCACTGATTACTTGAACTTCTTATGTGCTTCCGGATATGACCAACAACTCATTTCCGCACTCAATTTCAATAGGACATTCATTTGTTCGGGATCTCACAGCATAACAGATTTGAACTACCCTTCAATCACATTGCCAAATCTTGGCTTAAAACCCGTTGAGGATGCATGGGTGACTGATCCAGTGCCGCTAGTGACAGAAGTGCTAGATCATCCCAGAAGTACTCGATCTCCTTAG	2238	0.4348	MDTPKIMPYTYRYPALLGWLACLSKDQMRRAKSEMLGYVWVKKVNEKETRERKRIESECYIIYLGAHSHGPSPTSVDLEIATYSHYDLLGSILGSQEKAKETIIYSYNRHINGFAALLEEEEAADIAKNPNVVSVFLSKEHKLHTTRSWEFLGLHRNGRNSAWQKGRFGENTIIGNIDTGIWPESQSFNDKGFGPIPSKWRGGNVCQINRLRGSKRNPCNRKLIGARFFSKAFEAYNGQLRPSQYTARDFVGHGTHTLSTAGGNFVPGASVFAVGNGTAKGGSPKARVAAYKVCWSLTDPVSCFGADVLAAIDQAIDDGVDVINLSIGGFHVVTPEGIFTDEVSIGAFHAIARNILLVASAGNDGPTPRSVVNVAPWVFTIAASTIDRDFSSTLTIVGNNQQIMGASLFVDLPPNQAFSLILSTDAKLSNATFRDTQLCRPGTLDPTKVNGKIVSCIREGKIKSVAEGQEALSAGAKGMILANQKQNGNTLLAEPHVLPVLSYPDEHKDTKPASTIKMSPARTLFERKPAPVMASFSSRGPNPIQPSILKPDVTAPGVNILAAYSEFASASNLLTDSRRGFKFNVLQGTSMSCPHVAGIAGLLKTLHPDWSPAAIKSAIMTTATTRDNTNKPIQDAFDKTLATPFAYGSGQVQPNLAIDPGLVYDLSLTDYLNFLCASGYDQQLISALNFNRTFICSGSHSITDLNYPSITLPNLGLKPVEDAWVTDPVPLVTEVLDHPRSTRSP	745

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g00074	745	FunFam	Subtilisin-like protease SBT1.5	171	399	-	-
	Pumo5g00074	745	Pfam	Peptidase inhibitor I9	60	144	IPR010259	-
	Pumo5g00074	745	ProSitePatterns	Serine proteases, subtilase family, serine active site.	588	598	IPR023828	-
	Pumo5g00074	745	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	74	712	IPR045051	-
	Pumo5g00074	745	CDD	PA_subtilisin_like	396	516	-	-
	Pumo5g00074	745	CDD	Peptidases_S8_3	141	624	IPR034197	-
	Pumo5g00074	745	PRINTS	Subtilisin serine protease family (S8) signature	249	262	IPR015500	-
	Pumo5g00074	745	PRINTS	Subtilisin serine protease family (S8) signature	587	603	IPR015500	-
	Pumo5g00074	745	PRINTS	Subtilisin serine protease family (S8) signature	169	188	IPR015500	-
	Pumo5g00074	745	SUPERFAMILY	Subtilisin-like	143	662	IPR036852	GO:0004252\|GO:0006508
	Pumo5g00074	745	FunFam	Subtilisin-like protease SBT5.3	21	144	-	-
	Pumo5g00074	745	Pfam	Subtilase family	169	628	IPR000209	GO:0006508\|GO:0008236
	Pumo5g00074	745	ProSiteProfiles	Serine proteases, subtilase domain profile.	148	658	-	-
	Pumo5g00074	745	Gene3D	Peptidase S8/S53 domain	172	671	IPR036852	GO:0004252\|GO:0006508
	Pumo5g00074	745	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	42	144	IPR037045	-
	Pumo5g00074	745	Gene3D	-	387	525	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g00074	Pumo-Chr5	3086890	3113252	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g00074	56	715	Subtilisin-like Serine Gene Family	AT2G04160	52.679	0.0	677

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g00074	-		-	gmx:100813564	1132.47