Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00069 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTGGTTGAGGTATCTAATGCACACACGGCTGCAATTAGAGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGCGTGGGATTCCAGCAAGAGAAGGGAATCAGTTTTCGAAATCACGGGATGGCCCTATGACACATCTGGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCTCGAATAGTTTTGGTAAGAGAGGATATGGGGTTCAATACACGCTGTCAAGAGCCTCCCTCCCCTGCGCCTACAAGAACGTGGAAAGGAAAGGGCTCCTTACCTGAAGCTGTAGAACTTGTGCCTGCTATTGAGAAATTGAAGGGTGGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCACCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTAATGAAGAGTGTGTCCTTGAAGGGTCCTTTCTTAGAGGATCTTTCAATTCGTGTTCCTGCTAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAAGCCCGGTTGAAGAATCAAATGAGATGGGTAACTTATCCTCGCCATTTTCAGGTGCTCGTGCATCTCAGAATACTGAGAACTCTCCTCTTGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTCTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACAAAAGGAAGTGTCAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAGCACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCACAGACAGAAAGAGAGATATTGCAGTTGCTGGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTACACACGTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCGGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTCGTCTATCGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTTAGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACTGGCGACCCCTCAAAACGAGCTGGTGGTGCATTCTGTGTCCAGCCGGCTTGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCTCGGCTCTTTGCTCAGAAAAATAA 1698 0.457 MERVAEPKVLPRSLPVLVEVSNAHTAAIREAGQRLNGQDVSSVRGIPAREGNQFSKSRDGPMTHLASIREVAQLSNARIVLVREDMGFNTRCQEPPSPAPTRTWKGKGSLPEAVELVPAIEKLKGGNDSFVETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAGCLMKSVSLKGPFLEDLSIRVPAKKPSLAVVSPAESPVEESNEMGNLSSPFSGARASQNTENSPLAPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDWRPLKTSWWCILCPAGLYRAFISMHPAFMFHASALCSEK 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00069 565 FunFam Serine/threonine-protein kinase D6PK-like 363 448 - -
Pumo5g00069 565 MobiDBLite consensus disorder prediction 197 261 - -
Pumo5g00069 565 SUPERFAMILY Protein kinase-like (PK-like) 347 515 IPR011009 -
Pumo5g00069 565 Gene3D Phosphorylase Kinase; domain 1 363 448 - -
Pumo5g00069 565 ProSiteProfiles Protein kinase domain profile. 365 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00069 565 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Pumo5g00069 565 MobiDBLite consensus disorder prediction 289 342 - -
Pumo5g00069 565 PANTHER FLIPPASE KINASE 1-RELATED 143 530 - -
Pumo5g00069 565 SMART serkin_6 365 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00069 565 MobiDBLite consensus disorder prediction 290 338 - -
Pumo5g00069 565 MobiDBLite consensus disorder prediction 206 232 - -
Pumo5g00069 565 Pfam Protein kinase domain 366 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00069 565 FunFam serine/threonine-protein kinase D6PK-like 449 516 - -
Pumo5g00069 565 Gene3D Transferase(Phosphotransferase) domain 1 449 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00069 Pumo-Chr5 2811124 2816471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00069 1 537 AGC Kinase Gene Family AT2G44830 61.812 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pumo5g00069 Pkinase 4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00069 - - gmx:100800019 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo7g01929 7 51270557 51272607 Pumo5g00069 5 2811124 2816471 PCT