Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00058 ATGACATCAAAGTTCTCCCTCATACACCAAGTTACCATGGATCCCTTTAAAGGACAAGGAGGCATTCAGATGCTGCTAACTGCTGAACAAGAAGCCCAACATATTGTTTCTAATGCAAGAAATTTAAGGACCCAAAGGTTAAAGCAGGCAAAGGATGAGGCAGAAAGGGAGGCAGCACAATACAGATCTCACATGGAAGATGAGTATCAAAAGTCAATTTCAGAGAACACTGGGAGTTCTGGATCTAATGTGAAAAGGCTTGAGGAAGAGACAGATGCTAAGATTAAAAATTTAAAGAAATCAACTTCAAAGGTCTCATCAGAAGTGGTTGACATGCTACTCAAGTATGTTACAAACATCAAAGCATAA 369 0.393 MTSKFSLIHQVTMDPFKGQGGIQMLLTAEQEAQHIVSNARNLRTQRLKQAKDEAEREAAQYRSHMEDEYQKSISENTGSSGSNVKRLEEETDAKIKNLKKSTSKVSSEVVDMLLKYVTNIKA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00058 122 Coils Coil 44 71 - -
Pumo5g00058 122 FunFam V-type proton ATPase subunit G 15 122 - -
Pumo5g00058 122 Pfam Vacuolar (H+)-ATPase G subunit 19 121 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pumo5g00058 122 Coils Coil 84 104 - -
Pumo5g00058 122 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 13 121 IPR005124 GO:0016471|GO:0046961|GO:1902600
Pumo5g00058 122 MobiDBLite consensus disorder prediction 52 71 - -
Pumo5g00058 122 Gene3D - 14 122 - -
Pumo5g00058 122 MobiDBLite consensus disorder prediction 52 88 - -
Pumo5g00058 122 NCBIfam V-type ATPase subunit G 20 122 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00058 Pumo-Chr5 2622813 2623721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00058 20 120 Primary Pumps ATPases(2) AT4G23710 53.465 5.70e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00058 K02152 - gmx:100818549 200.675