Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g00033 | ATGGGGTTTAGGAATAATGCAATTCAGGCAGGGAGTTTGGATGTGGGAAAGTCAAAGGGAAGGACGCAAAAGGATGGTGATGAAAAGGAAATTGGGTGTTGTGTTAAATTCTGTTTCATTGGGAGCTGTATACCTTCAAGATCAAAGGTTGATAACTCCATAAGTGGCACTAGTGCTAACAGTGTGGAAAAAACATCTGCATATGAGAAAAGCAAGAAGGAAACAAATGCTCGTCCAGGGTCCTCTACATCAACCAGTAATGCAGAAAGTATCCCTTCCACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAATTTACATTCAATGAGCTAAAGTTGGCTACTAGGAATTTCAGACCAGAGAGTCTTCTTGGTGAGGGAGGGTTTGGTTGTGTGTTCAAGGGTTGGATTGAGGAAAATGGAACTGCACCTGTGAAACCTGGTACTGGGCTTACTGTTGCAGTCAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCAGAGTTAGACATTCTTGGTGACCTTGTCCATCCGAATCTGGTCAAATTGGTTGGTTACTGTATTGAAGATGACCAAAGATTATTGGTTTATGAATGTATGCCCCGTGGAAGTTTGGAGAACCACCTCTTCAGAAAAGGGTCGTTGCCTCTTCCTTGGTCTATTAGAATGAAAATTGCACTTGGTGCTGCAAAAGGTCTTGCTTTTCTCCATGAAGAAGCTCAGAGGCCTGTAATCTATCGTGATTTTAAGACGTCTAATATTCTGTTAGATGCGGAATACAATGCCAAGCTCTCTGATTTTGGACTCGCCAAAGATGGTCCTGAAGGGGAAAAGACACACATATCAACAAGAGTCATGGGAACATATGGTTATGCAGCTCCTGAGTATGTGATGACTGGACATTTGACATCAAAAAGTGATGTCTATAGTTTTGGAGTAGTGCTACTTGAAATGCTCACTGGCCGGCGTTCTATCGATAAAAATAGACCAAATGGGGAGCACAATCTTGTGGAGTGGGCAAGGCCTGTACTTGGGGACCGGAGGATGTTACTACGGATAATTGATCCTCGCCTTGAAGGTCACTTCTCTGTTAAAGGGTCACAGAAGGCTGCCCAGCTGGCGGCTCAATGCCTTAGCCGTGATCCGAAATCCAGACCTATGATGAGTGAAGTTGTTCAAGCTCTGAAGCCTTTGCAAAATCTCAAGGATTTGGCTATCTCATCTTATCACTTCCAGGTTGCGCGAGTAGATCGTACCATGTCCATGCCAAATTCCAAAAATGGTATGCAAGCACAGTTAGCATCTTTATCAAGAAAGGGTCAACATGTAAGGATCTTGTCAAGTCCAAAAGGTCCTCATGGTTCTCCACATCATCACTATATCAAGTCACCAAAACCTAATGGATAA | 1431 | 0.4347 | MGFRNNAIQAGSLDVGKSKGRTQKDGDEKEIGCCVKFCFIGSCIPSRSKVDNSISGTSANSVEKTSAYEKSKKETNARPGSSTSTSNAESIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELDILGDLVHPNLVKLVGYCIEDDQRLLVYECMPRGSLENHLFRKGSLPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGEKTHISTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSIDKNRPNGEHNLVEWARPVLGDRRMLLRIIDPRLEGHFSVKGSQKAAQLAAQCLSRDPKSRPMMSEVVQALKPLQNLKDLAISSYHFQVARVDRTMSMPNSKNGMQAQLASLSRKGQHVRILSSPKGPHGSPHHHYIKSPKPNG | 476 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g00033 | 476 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 252 | 264 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo5g00033 | 476 | ProSitePatterns | Protein kinases ATP-binding region signature. | 128 | 160 | IPR017441 | GO:0005524 | |
Pumo5g00033 | 476 | MobiDBLite | consensus disorder prediction | 450 | 476 | - | - | |
Pumo5g00033 | 476 | FunFam | Serine/threonine-protein kinase BIK1 | 89 | 207 | - | - | |
Pumo5g00033 | 476 | PANTHER | OS01G0588500 PROTEIN-RELATED | 77 | 407 | - | - | |
Pumo5g00033 | 476 | MobiDBLite | consensus disorder prediction | 77 | 95 | - | - | |
Pumo5g00033 | 476 | FunFam | Probable serine/threonine-protein kinase PBL8 | 208 | 423 | - | - | |
Pumo5g00033 | 476 | SUPERFAMILY | Protein kinase-like (PK-like) | 96 | 403 | IPR011009 | - | |
Pumo5g00033 | 476 | Pfam | Protein kinase domain | 125 | 401 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g00033 | 476 | Gene3D | Transferase(Phosphotransferase) domain 1 | 208 | 424 | - | - | |
Pumo5g00033 | 476 | ProSiteProfiles | Protein kinase domain profile. | 122 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g00033 | 476 | MobiDBLite | consensus disorder prediction | 50 | 95 | - | - | |
Pumo5g00033 | 476 | MobiDBLite | consensus disorder prediction | 50 | 65 | - | - | |
Pumo5g00033 | 476 | CDD | STKc_IRAK | 128 | 406 | - | - | |
Pumo5g00033 | 476 | Gene3D | Phosphorylase Kinase; domain 1 | 102 | 207 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g00033 | Pumo-Chr5 | 2278786 | 2283444 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g00033 | 78 | 419 | Glycoside Hydrolase | AT3G07070 | 51.977 | 1.16e-117 | 350 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Pumo5g00033 | Pkinase | 9.6e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g00033 | - | - | gmx:100305393 | 925.235 |